RNA–Protein interactions for RNA: ENST00000504173.1

NUP54-203, Transcript of nucleoporin 54, humanhuman

TSL 3

Gene NUP54, Length 314 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-203ENST00000504173 AFMP43652 599 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 GPC3P51654 580 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 CCL23P55773 120 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 NLRP11P59045 1033 aaKnown RBP11.09□□□□□ -0.63
NUP54-203ENST00000504173 CDC42EP1Q00587 391 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 LAMTOR4Q0VGL1 99 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 TFDP1Q14186 410 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 MXD4Q14582 209 aaPredicted RBP11.09□□□□□ -0.63
NUP54-203ENST00000504173 KIZQ2M2Z5 673 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 LONRF3Q496Y0 759 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 ARSHQ5FYA8 562 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 FAM26DQ5JW98 314 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 DYMQ7RTS9 669 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 FMR1NBQ8N0W7 255 aaPredicted RBP11.09□□□□□ -0.63
NUP54-203ENST00000504173 ZNF710Q8N1W2 664 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 PHOSPHO2Q8TCD6 241 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 ASAP3Q8TDY4 903 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 NLRP7Q8WX94 980 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 STAMQ92783 540 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 CCDC34Q96HJ3 373 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 ZNF668Q96K58 619 aaPredicted RBP11.09□□□□□ -0.63
NUP54-203ENST00000504173 IFT74Q96LB3 600 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 DRC1Q96MC2 740 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 NLRP4Q96MN2 994 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 REEP2Q9BRK0 252 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 CELF4Q9BZC1 486 aaKnown RBP11.09□□□□□ -0.63
NUP54-203ENST00000504173 WNT8AQ9H1J5 351 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 ZHX3Q9H4I2 956 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 POLD4Q9HCU8 107 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 LMBRD1Q9NUN5 540 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 FAM86C1Q9NVL1 165 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 KBTBD4Q9NVX7 518 aa11.09□□□□□ -0.63
NUP54-203ENST00000504173 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 MYMKA6NI61 221 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 LRRIQ4A6NIV6 560 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ZBBXA8MT70 800 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ASAP2O43150 1006 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 KINO60870 393 aaKnown RBP11.08□□□□□ -0.64
NUP54-203ENST00000504173 GPR32O75388 356 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 NR1I2O75469 434 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 FAM13AO94988 1023 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 CHRNA1P02708 482 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 PFKMP08237 780 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 IQCF3P0C7M6 154 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 SRGAP2CP0DJJ0 459 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 GLRA2P23416 452 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 MGAT3Q09327 533 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 MAPK7Q13164 816 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 DMP1Q13316 513 aaPredicted RBP11.08□□□□□ -0.64
NUP54-203ENST00000504173 CAPSQ13938 189 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 GIT2Q14161 759 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 PPP2R5AQ15172 486 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 KRBA2Q6ZNG9 492 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ASCL5Q7RTU5 278 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ZNF410Q86VK4 478 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 KSR1Q8IVT5 923 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ADHFE1Q8IWW8 467 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 RNF149Q8NC42 400 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ENGASEQ8NFI3 743 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 DDX12PQ92771 950 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 EDAQ92838 391 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 PAGE5Q96GU1 130 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 SCLYQ96I15 445 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 SLC9A7Q96T83 725 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 OSMRQ99650 979 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 ODF2LQ9ULJ1 636 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 FAM50BQ9Y247 325 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 TANC1Q9C0D5 1861 aa11.08□□□□□ -0.64
NUP54-203ENST00000504173 A0A087WZ62 844 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 MED19A0JLT2 244 aaPredicted RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 PRR23AA6NEV1 266 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 SFI1A8K8P3 1242 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 PARNO95453 639 aaKnown RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 GHRP10912 638 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 IDEP14735 1019 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 RFC2P35250 354 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 PHKA2P46019 1235 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 CRYBB1P53674 252 aaPredicted RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 ASIC1P78348 528 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 SNW1Q13573 536 aaKnown RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 KANK3Q6NY19 840 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 TRAF7Q6Q0C0 670 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 GRAMD1CQ8IYS0 662 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 DAW1Q8N136 415 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 DEPTORQ8TB45 409 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 BSNDQ8WZ55 320 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 ATOH1Q92858 354 aaPredicted RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 COL26A1Q96A83 441 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 TIGD1Q96MW7 591 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 C7orf25Q9BPX7 421 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 FDXACB1Q9BRP7 624 aaPredicted RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 GCOM2Q9BZD3 368 aaPredicted RBP11.07□□□□□ -0.64
NUP54-203ENST00000504173 TRIM9Q9C026 710 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 BLZF1Q9H2G9 400 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 ADAMTS10Q9H324 1103 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 CDHR5Q9HBB8 845 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 PARVGQ9HBI0 331 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 DACT1Q9NYF0 836 aa11.07□□□□□ -0.64
NUP54-203ENST00000504173 DMXL1Q9Y485 3027 aa11.06□□□□□ -0.64
NUP54-203ENST00000504173 CCDC169A6NNP5 214 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms