RNA–Protein interactions for RNA: ENST00000504131.6

CLCN3-204, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 5 BASIC

Gene CLCN3, Length 5,592 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-204ENST00000504131 PGDP52209 483 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 MYL6P60660 151 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 EAPPQ56P03 285 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 VPS53Q5VIR6 699 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 GPR141Q7Z602 305 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CROCCP3Q8IVE0 287 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RHOT2Q8IXI1 618 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 COL26A1Q96A83 441 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SELENONQ9NZV5 590 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 BCAP29Q9UHQ4 241 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 PNMA3Q9UL41 463 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 MED16Q9Y2X0 877 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 FYCO1Q9BQS8 1478 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SRRM3A6NNA2 597 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 PDLIM1O00151 329 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TRDMT1O14717 391 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 APAF1O14727 1248 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 KPNA5O15131 536 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 APOA1P02647 267 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 IFNA16P05015 189 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 NFICP08651 508 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 UBTFL1P0CB47 393 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 HOXD10P28358 340 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RASSF2P50749 326 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RAD23BP54727 409 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CYP4F8P98187 520 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TCIRG1Q13488 830 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TMEM266Q2M3C6 531 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SNF8Q96H20 258 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TBC1D32Q96NH3 1257 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 OLA1Q9NTK5 396 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TBC1D22BQ9NU19 505 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 KBTBD4Q9NVX7 518 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ZIM2Q9NZV7 527 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CLEC4AQ9UMR7 237 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 C15orf41Q9Y2V0 281 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 KIAA0556O60303 1618 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 GPRASP1Q5JY77 1395 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 B4E1Z4 1266 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SEC24BO95487 1268 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CFBP00751 764 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CPA1P15085 419 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 EEF1DP29692 281 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 POLD2P49005 469 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ATXN1P54253 815 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 GUCY2DQ02846 1103 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CDC16Q13042 620 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SPATS1Q496A3 300 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ATP13A4Q4VNC1 1196 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 DCAF8Q5TAQ9 597 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 B3GNT6Q6ZMB0 384 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 C3orf58Q8NDZ4 430 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RNF38Q9H0F5 515 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 NAPBQ9H115 298 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 KLHL31Q9H511 634 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC144AA2RUR9 1427 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 PTPDC1A2A3K4 754 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 POLR2DO15514 142 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ZMYND10O75800 440 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 MYBP10242 640 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 PLTPP55058 493 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 UBE3AQ05086 875 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CKAP4Q07065 602 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CAPRIN1Q14444 709 aaKnown RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CFAP161Q6P656 301 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CNSTQ6PJW8 725 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TRIM67Q6ZTA4 783 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CCDC33Q8N5R6 958 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SNX31Q8N9S9 440 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 GIMAP8Q8ND71 665 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 OR8K1Q8NGG5 319 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SGK3Q96BR1 496 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CDCA5Q96FF9 252 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SNX27Q96L92 541 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 IRX2Q9BZI1 471 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SHCBP1LQ9BZQ2 653 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TNKS2Q9H2K2 1166 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RNPEPQ9H4A4 650 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 THAP9Q9H5L6 903 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SCPEP1Q9HB40 452 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 PPP2R3BQ9Y5P8 575 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 MAP3K5Q99683 1374 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 TRPC5OSA6NMA1 111 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 AKAP10O43572 662 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 NOS1APO75052 506 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 HMOX1P09601 288 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 CSF2RAP15509 400 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 GJA1P17302 382 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SERPINB1P30740 379 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 RGS19P49795 217 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 ESRRGP62508 458 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 UAP1Q16222 522 aaPredicted RBP6.63□□□□□ -1.35
CLCN3-204ENST00000504131 EGFLAMQ63HQ2 1017 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 EXOC3L1Q86VI1 746 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 SESTD1Q86VW0 696 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 VSIG1Q86XK7 387 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 KRT78Q8N1N4 520 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 PHKBQ93100 1093 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 MYLK2Q9H1R3 596 aa6.63□□□□□ -1.35
CLCN3-204ENST00000504131 FBXO10Q9UK96 956 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms