RNA–Protein interactions for RNA: ENST00000503492.5

PCDH1-204, Transcript of protocadherin 1, humanhuman

TSL 5 BASIC

Gene PCDH1, Length 2,373 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-204ENST00000503492 RBM12Q9NTZ6 932 aaKnown RBP24.4■■□□□ 1.5
PCDH1-204ENST00000503492 A0A0A6YYK5 440 aaPredicted RBP24.39■■□□□ 1.5
PCDH1-204ENST00000503492 ADM5C9JUS6 153 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 SUPT20HL2P0C7V6 817 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 CCDC172P0C7W6 258 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 MYBL2P10244 700 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 SNRNP35Q16560 246 aaKnown RBP24.39■■□□□ 1.5
PCDH1-204ENST00000503492 CCDC70Q6NSX1 233 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 CCNI2Q6ZMN8 369 aaPredicted RBP24.39■■□□□ 1.5
PCDH1-204ENST00000503492 FMNL3Q8IVF7 1028 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 ANKRD35Q8N283 1001 aa24.39■■□□□ 1.5
PCDH1-204ENST00000503492 MSL3Q8N5Y2 521 aaKnown RBP24.39■■□□□ 1.5
PCDH1-204ENST00000503492 DMGDHQ9UI17 866 aaKnown RBP24.39■■□□□ 1.5
PCDH1-204ENST00000503492 MXI1P50539 228 aa24.39■■□□□ 1.49
PCDH1-204ENST00000503492 DMTNQ08495 405 aa24.39■■□□□ 1.49
PCDH1-204ENST00000503492 MCPH1Q8NEM0 835 aa24.39■■□□□ 1.49
PCDH1-204ENST00000503492 IGSF9BQ9UPX0 1349 aa24.39■■□□□ 1.49
PCDH1-204ENST00000503492 LRRIQ3A6PVS8 624 aaPredicted RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 H3BQF6 201 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 POLR3GO15318 223 aaPredicted RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 ICAM3P32942 547 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 MRPS25P82663 173 aaKnown RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 CYFIP1Q7L576 1253 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 ZNF526Q8TF50 670 aaPredicted RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 HINFPQ9BQA5 517 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 PDE11AQ9HCR9 933 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 ZCCHC17Q9NP64 241 aaKnown RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 ADARB2Q9NS39 739 aaKnown RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 PAPPA2Q9BXP8 1791 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 OTOFQ9HC10 1997 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 PMM2O15305 246 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 EIF3JO75822 258 aaKnown RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 MAP9Q49MG5 647 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 GSPT2Q8IYD1 628 aaKnown RBP24.38■■□□□ 1.49
PCDH1-204ENST00000503492 ATP6V0A4Q9HBG4 840 aa24.38■■□□□ 1.49
PCDH1-204ENST00000503492 TMCO5BA8MYB1 307 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 KIF4AO95239 1232 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 RTP1P59025 263 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 RPS6KA1Q15418 735 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 XKR3Q5GH77 459 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 CSADQ9Y600 493 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 MYH9P35579 1960 aaKnown RBP24.37■■□□□ 1.49
PCDH1-204ENST00000503492 ATP4AP20648 1035 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 TNFAIP3P21580 790 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 ALDH5A1P51649 535 aaPredicted RBP24.37■■□□□ 1.49
PCDH1-204ENST00000503492 MTERF2Q49AM1 385 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 RIOX2Q8IUF8 465 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 PARD3BQ8TEW8 1205 aa24.37■■□□□ 1.49
PCDH1-204ENST00000503492 A0A0G2JMZ2 1700 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 SLC7A5Q01650 507 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 MAP2K1Q02750 393 aaPredicted RBP24.36■■□□□ 1.49
PCDH1-204ENST00000503492 SEPT14Q6ZU15 432 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 TAS1R3Q7RTX0 852 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 SLFN11Q7Z7L1 901 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 PALB2Q86YC2 1186 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 KAT5Q92993 513 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 CCDC127Q96BQ5 260 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 DCPSQ96C86 337 aaKnown RBP24.36■■□□□ 1.49
PCDH1-204ENST00000503492 POLR3FQ9H1D9 316 aaPredicted RBP24.36■■□□□ 1.49
PCDH1-204ENST00000503492 USP20Q9Y2K6 914 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 SYNGAP1Q96PV0 1343 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 ATG7O95352 703 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 PTPROQ16827 1216 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 SLC20A1Q8WUM9 679 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 TAF4BQ92750 862 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 ZBTB9Q96C00 473 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 FBXL18Q96ME1 805 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 POP1Q99575 1024 aaKnown RBP24.36■■□□□ 1.49
PCDH1-204ENST00000503492 TAS2R14Q9NYV8 317 aa24.36■■□□□ 1.49
PCDH1-204ENST00000503492 TMEM253P0C7T8 217 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 GADL1Q6ZQY3 521 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 SULF1Q8IWU6 871 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 POMGNT1Q8WZA1 660 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 SEMA4DQ92854 862 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 AGPAT1Q99943 283 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 UTP3Q9NQZ2 479 aaKnown RBP eCLIP24.35■■□□□ 1.49
PCDH1-204ENST00000503492 MAFBQ9Y5Q3 323 aaPredicted RBP24.35■■□□□ 1.49
PCDH1-204ENST00000503492 NCANO14594 1321 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 TULP1O00294 542 aaPredicted RBP24.35■■□□□ 1.49
PCDH1-204ENST00000503492 CES2O00748 559 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 KCNK3O14649 394 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 RUBCNQ92622 972 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 VTI1AQ96AJ9 217 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 MFSD14AQ96MC6 490 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 OSGEPQ9NPF4 335 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 ZNF302Q9NR11 478 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 ARHGAP28Q9P2N2 729 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 STXBP5LQ9Y2K9 1186 aa24.35■■□□□ 1.49
PCDH1-204ENST00000503492 ZBTB48P10074 688 aaPredicted RBP24.34■■□□□ 1.49
PCDH1-204ENST00000503492 RNASE9P60153 205 aaKnown RBP24.34■■□□□ 1.49
PCDH1-204ENST00000503492 LMBR1Q8WVP7 490 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 IFT74Q96LB3 600 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 SEPT11Q9NVA2 429 aaKnown RBP24.34■■□□□ 1.49
PCDH1-204ENST00000503492 FBXO40Q9UH90 709 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 FAM170AA1A519 330 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 IRF6O14896 467 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 ABCB4P21439 1286 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 TNNT3P45378 269 aaPredicted RBP24.34■■□□□ 1.49
PCDH1-204ENST00000503492 EMC2Q15006 297 aa24.34■■□□□ 1.49
PCDH1-204ENST00000503492 KRT39Q6A163 491 aa24.34■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms