RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CCDC169A6NNP5 214 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 H3BQF6 201 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CPLX1O14810 134 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 HBP1O60381 514 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PCSK2P16519 638 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 YBX3P16989 372 aaKnown RBP eCLIP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NR1D1P20393 614 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 LMOD1P29536 600 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GTF2H1P32780 548 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CDK7P50613 346 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 IRX4P78413 519 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SIX1Q15475 284 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 USH1GQ495M9 461 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 IRGCQ6NXR0 463 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SLC4A10Q6U841 1118 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CCNI2Q6ZMN8 369 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 C1orf186Q6ZWK4 172 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM74Q86UV6 250 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TRIM73Q86UV7 250 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 RAB11FIP4Q86YS3 637 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF683Q8IZ20 524 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 RNF10Q8N5U6 811 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MYCBPAPQ8TBZ2 947 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 DDX1Q92499 740 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SHC3Q92529 594 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PEX13Q92968 403 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF653Q96CK0 615 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NAP1L4Q99733 375 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TUBB6Q9BUF5 446 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ISCUQ9H1K1 167 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 KDM4CQ9H3R0 1056 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SIRT5Q9NXA8 310 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 LRCH1Q9Y2L9 728 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MAP3K2Q9Y2U5 619 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PSMD14O00487 310 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SMIM24O75264 130 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 UBTFL1P0CB47 393 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ACADSP16219 412 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ACVR2AP27037 513 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 LSP1P33241 339 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NCKAP1LP55160 1127 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 RRP1BQ14684 758 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CBX2Q14781 532 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ESCO1Q5FWF5 840 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PLPP4Q5VZY2 271 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PLA2G4FQ68DD2 849 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SHC4Q6S5L8 630 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CAPN12Q6ZSI9 719 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MRPL10Q7Z7H8 261 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NOP9Q86U38 636 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 KIF18BQ86Y91 864 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 NSMCE1Q8WV22 266 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 LMBR1Q8WVP7 490 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 IFT81Q8WYA0 676 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 DHX58Q96C10 678 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 RAB3IPQ96QF0 476 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 FAM117AQ9C073 453 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 EHMT1Q9H9B1 1298 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CEP126Q9P2H0 1117 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TSPYL4Q9UJ04 414 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GJD2Q9UKL4 321 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PRR12Q9ULL5 1215 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PCDHA4Q9UN74 947 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MYH10P35580 1976 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SMIM31A0A1B0GVY4 71 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 BICDL2A1A5D9 508 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GMNCA6NCL1 334 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CCDC188H7C350 402 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SYKP43405 635 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 VSNL1P62760 191 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PIN1Q13526 163 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ITGA9Q13797 1035 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 KPNB1Q14974 876 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 KCNV1Q6PIU1 500 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 WDR59Q6PJI9 974 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MAATS1Q7Z4T9 603 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 C4orf19Q8IY42 314 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 IFNL3Q8IZI9 196 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PAWRQ96IZ0 340 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CDK5RAP3Q96JB5 506 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 RUNDC3BQ96NL0 473 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 CCT8L2Q96SF2 557 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PUS7LQ9H0K6 701 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 EPB41L4BQ9H329 900 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GOLPH3LQ9H4A5 285 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ARNT2Q9HBZ2 717 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SLC40A1Q9NP59 571 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 EXOC1Q9NV70 894 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TMED5Q9Y3A6 229 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 REXO2Q9Y3B8 237 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ZNF318Q5VUA4 2279 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 UBR5O95071 2799 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 PPP1R3GB7ZBB8 358 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 GCOM1H8Y6P7 765 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 ZSCAN9O15535 394 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 SART1O43290 800 aaKnown RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 WFS1O76024 890 aa3.02□□□□□ -1.93
NEDD4-204ENST00000503468 FOSP01100 380 aaPredicted RBP3.02□□□□□ -1.93
NEDD4-204ENST00000503468 MYZAPP0CAP1 466 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms