RNA–Protein interactions for RNA: ENST00000503464.1

TOPBP1-203, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 525 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-203ENST00000503464 IFT122Q9HBG6 1241 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SETD4Q9NVD3 440 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 HSPBP1Q9NZL4 362 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 SUCLA2Q9P2R7 463 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 MAGEC2Q9UBF1 373 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 ZNF215Q9UL58 517 aaPredicted RBP7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PYCARDQ9ULZ3 195 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 STYXL1Q9Y6J8 313 aa7.56□□□□□ -1.2
TOPBP1-203ENST00000503464 PDCD11Q14690 1871 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 GOLGA8IPA6NC78 632 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 GOLGA8JA6NMD2 632 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 B4GALT5O43286 388 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 FAM189A1O60320 539 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 GNA14O95837 355 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 VTNP04004 478 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 HMGCRP04035 888 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 MYL3P08590 195 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 C6orf222P0C671 652 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 SRGAP2CP0DJJ0 459 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 RPL13P26373 211 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 CNGA1P29973 690 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 DNM2P50570 870 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ADKP55263 362 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 PTENP60484 403 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 DLG4P78352 724 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ZNF200P98182 395 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 APBA1Q02410 837 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 MBTD1Q05BQ5 628 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 RBL2Q08999 1139 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 KCNH2Q12809 1159 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 MYBPC2Q14324 1141 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 MXD4Q14582 209 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 PPP2R5AQ15172 486 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 SYCP1Q15431 976 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 AMHR2Q16671 573 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 FILIP1LQ4L180 1135 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 BRDTQ58F21 947 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ZBTB41Q5SVQ8 909 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 IFNLR1Q8IU57 520 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 RHPN2Q8IUC4 686 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 CBWD2Q8IUF1 395 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 LRRC8AQ8IWT6 810 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 FAM186BQ8IYM0 893 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 KIAA0319LQ8IZA0 1049 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 METTL13Q8N6R0 699 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 RNF149Q8NC42 400 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 KLHDC9Q8NEP7 349 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ANKRD20A12PQ8NF67 263 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 DEPTORQ8TB45 409 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 GOLGA5Q8TBA6 731 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 PXYLP1Q8TE99 480 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 TCP11Q8WWU5 503 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 SAAL1Q96ER3 474 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ERO1AQ96HE7 468 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ZBTB45Q96K62 511 aaPredicted RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 FBXL18Q96ME1 805 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 NLRP4Q96MN2 994 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 TARS2Q9BW92 718 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 TMX1Q9H3N1 280 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 TMEM134Q9H6X4 195 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 CGNQ9P2M7 1197 aaKnown RBP7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 ZKSCAN5Q9Y2L8 839 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 BRCA2P51587 3418 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 TRIP11Q15643 1979 aa7.55□□□□□ -1.2
TOPBP1-203ENST00000503464 GRIN2DO15399 1336 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 TTC26A0AVF1 554 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 GOLGA6L6A8MZA4 724 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 H0YCG3 227 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 K7ERI5 159 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 HNRNPDLO14979 420 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 MAGEB2O15479 319 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 MFAP3LO75121 409 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CSDE1O75534 798 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 NOL4O94818 638 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 GNRH1P01148 92 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 INHAP05111 366 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 TPM3P06753 285 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 TRIM49P0CI25 452 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 TRIM49CP0CI26 452 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 RARBP10826 455 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 EPB41P11171 864 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 HSPA6P17066 643 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 GARTP22102 1010 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 FECHP22830 423 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 PROZP22891 400 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CST5P28325 142 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CASP14P31944 242 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 PSMC2P35998 433 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 GPC3P51654 580 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 GSDMDP57764 484 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 SNRPFP62306 86 aaKnown RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 POU5F1BQ06416 359 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 PPP3CAQ08209 521 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CBWD6Q4V339 395 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CBWD3Q5JTY5 395 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CBWD5Q5RIA9 395 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 E4F1Q66K89 784 aaPredicted RBP7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 NFRKBQ6P4R8 1299 aa7.54□□□□□ -1.2
TOPBP1-203ENST00000503464 CXCL17Q6UXB2 119 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms