RNA–Protein interactions for RNA: ENST00000503418.5

UBE2D3-215, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 662 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-215ENST00000503418 AGMOQ6ZNB7 445 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 RSAD1Q9HA92 442 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 C11orf16Q9NQ32 467 aa21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 USP15Q9Y4E8 981 aaPredicted RBP21.62■■□□□ 1.05
UBE2D3-215ENST00000503418 TSPAN1O60635 241 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 GPR37L1O60883 481 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 SPATA31C1P0DKV0 1188 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 CAPSQ13938 189 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 BMS1Q14692 1282 aaKnown RBP21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 UBXN11Q5T124 520 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 MAEAQ7L5Y9 396 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 TMEM173Q86WV6 379 aaPredicted RBP21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 NOSTRINQ8IVI9 506 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 CPB2Q96IY4 423 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 POLR3FQ9H1D9 316 aaPredicted RBP21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 TUFT1Q9NNX1 390 aa21.61■■□□□ 1.05
UBE2D3-215ENST00000503418 DCXO43602 365 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 MED24O75448 989 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 AXLP30530 894 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 ARL2P36404 184 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 NCBP1Q09161 790 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 NOTUMQ6P988 496 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 MRPL10Q7Z7H8 261 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 CATSPER3Q86XQ3 398 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 VPS52Q8N1B4 723 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 ERMNQ8TAM6 284 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 FAM193BQ96PV7 902 aaPredicted RBP21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 DNAJB4Q9UDY4 337 aa21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 NOL7Q9UMY1 257 aaKnown RBP21.6■■□□□ 1.05
UBE2D3-215ENST00000503418 CNTNAP2Q9UHC6 1331 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 CARNS1A5YM72 827 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 C2orf71A6NGG8 1288 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 GALTP07902 379 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 XRCC6P12956 609 aaKnown RBP eCLIP21.59■■□□□ 1.054e-17■□□□□ 10.6
UBE2D3-215ENST00000503418 NCLP19338 710 aaKnown RBP21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 GLRA2P23416 452 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 SLC11A1P49279 550 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 MBTD1Q05BQ5 628 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 ORC2Q13416 577 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 PCBP1Q15365 356 aaKnown RBP eCLIP21.59■■□□□ 1.059e-7■□□□□ 10.8
UBE2D3-215ENST00000503418 POTEGQ6S5H5 508 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 ZNF280BQ86YH2 543 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 IFNLR1Q8IU57 520 aaPredicted RBP21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 MRPL43Q8N983 215 aaKnown RBP21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 IGSF21Q96ID5 467 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 APOL5Q9BWW9 433 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 EIF2AQ9BY44 585 aaKnown RBP21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 GPRC5CQ9NQ84 441 aa21.59■■□□□ 1.05
UBE2D3-215ENST00000503418 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 CXCL14O95715 111 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 POMCP01189 267 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 ITGA4P13612 1032 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 AFF1P51825 1210 aaKnown RBP21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 POU5F1BQ06416 359 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 KCNC3Q14003 757 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 NBR1Q14596 966 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 RABEP1Q15276 862 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 ANKRD54Q6NXT1 300 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 TMEM184AQ6ZMB5 413 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 TMEM87AQ8NBN3 555 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 SMG8Q8ND04 991 aaKnown RBP21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 CNNM3Q8NE01 707 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 BCL7CQ8WUZ0 217 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 AUTS2Q8WXX7 1259 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 POLR3CQ9BUI4 534 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 TRIM6Q9C030 488 aaPredicted RBP21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 ZBP1Q9H171 429 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 IPPQ9Y573 584 aa21.58■■□□□ 1.05
UBE2D3-215ENST00000503418 LRRIQ4A6NIV6 560 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 B4GALT3O60512 393 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 DDHD2O94830 711 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 TRAPPC10P48553 1259 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 DDX53Q86TM3 631 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 MCPH1Q8NEM0 835 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 CCDC51Q96ER9 411 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 NACC1Q96RE7 527 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 APOL6Q9BWW8 343 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 CSRNP2Q9H175 543 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 UBN1Q9NPG3 1134 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 KANSL3Q9P2N6 904 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 DBR1Q9UK59 544 aaKnown RBP21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 HES2Q9Y543 173 aa21.57■■□□□ 1.04
UBE2D3-215ENST00000503418 ST18O60284 1047 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 ARF4P18085 180 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 RPA1P27694 616 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 AMHR2Q16671 573 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 HAUS3Q68CZ6 603 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 RNF135Q8IUD6 432 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 CASP10Q92851 521 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 PHF7Q9BWX1 381 aaPredicted RBP21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 NFKBIZQ9BYH8 718 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 MUTYHQ9UIF7 546 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 HCN4Q9Y3Q4 1203 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 HCFC2Q9Y5Z7 792 aa21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 TDRD15B5MCY1 1934 aaKnown RBP21.56■■□□□ 1.04
UBE2D3-215ENST00000503418 ARHGEF35A5YM69 484 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 B4GALT5O43286 388 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 CLASP2O75122 1294 aaKnown RBP21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 CTSAP10619 480 aa21.55■■□□□ 1.04
UBE2D3-215ENST00000503418 MLH1P40692 756 aa21.55■■□□□ 1.04
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms