RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 ZBED2Q9BTP6 218 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 MAGEF1Q9HAY2 307 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 CHST12Q9NRB3 414 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 PRMT7Q9NVM4 692 aaPredicted RBP18.17■□□□□ 0.5
SCLT1-205ENST00000503401 TBC1D7Q9P0N9 293 aa18.17■□□□□ 0.5
SCLT1-205ENST00000503401 K7ENM7 598 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 TRAK2O60296 914 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 ZNF202O95125 648 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 NMT1P30419 496 aaKnown RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 SARSP49591 514 aaKnown RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 EFNA5P52803 228 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 ASIC1P78348 528 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 AMPD3Q01432 767 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 PRPF4BQ13523 1007 aaKnown RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 CUL4BQ13620 913 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 TMEM132AQ24JP5 1023 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 PPP4R3CPQ6ZMV5 832 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 FAM178BQ8IXR5 827 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 TMEM87AQ8NBN3 555 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 RNF169Q8NCN4 708 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 FIZ1Q96SL8 496 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 C1orf112Q9NSG2 853 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 PANK4Q9NVE7 773 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 DACT1Q9NYF0 836 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 YBX2Q9Y2T7 364 aaKnown RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 PHLPP2Q6ZVD8 1323 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 TLL1O43897 1013 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 MAPTP10636 758 aaKnown RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 NCKAP1LP55160 1127 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 PCBP1Q15365 356 aaKnown RBP eCLIP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 FAM187BQ17R55 369 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 HERC4Q5GLZ8 1057 aaPredicted RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 NOTUMQ6P988 496 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 FMR1NBQ8N0W7 255 aaPredicted RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 CRIPAKQ8N1N5 446 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 CNNM3Q8NE01 707 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 HPS3Q969F9 1004 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 C7orf25Q9BPX7 421 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 EIF2AQ9BY44 585 aaKnown RBP18.16■□□□□ 0.5
SCLT1-205ENST00000503401 LRRC27Q9C0I9 530 aa18.16■□□□□ 0.5
SCLT1-205ENST00000503401 MYO9BQ13459 2157 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 CNTNAP2Q9UHC6 1331 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 A0A0U1RQF3 1178 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 FRMD3A2A2Y4 597 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 LCHNA4D1U4 455 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 ACKR2O00590 384 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 PRPF40AO75400 957 aaKnown RBP18.15■□□□□ 0.5
SCLT1-205ENST00000503401 GATMP50440 423 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 SMAD3P84022 425 aaKnown RBP18.15■□□□□ 0.5
SCLT1-205ENST00000503401 NCBP1Q09161 790 aaKnown RBP18.15■□□□□ 0.5
SCLT1-205ENST00000503401 SNW1Q13573 536 aaKnown RBP18.15■□□□□ 0.5
SCLT1-205ENST00000503401 UBXN11Q5T124 520 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 NT5DC1Q5TFE4 455 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 KRBA2Q6ZNG9 492 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 HAUS6Q7Z4H7 955 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 ECHDC2Q86YB7 292 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 NPAS4Q8IUM7 802 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 PRIMPOLQ96LW4 560 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 TMEM134Q9H6X4 195 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 FAM105AQ9NUU6 356 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 USP25Q9UHP3 1055 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 LRFN2Q9ULH4 789 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 PCDHB7Q9Y5E2 793 aa18.15■□□□□ 0.5
SCLT1-205ENST00000503401 FNDC1Q4ZHG4 1894 aaPredicted RBP18.15■□□□□ 0.5
SCLT1-205ENST00000503401 PRR29P0C7W0 189 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 ATF7P17544 494 aaPredicted RBP18.14■□□□□ 0.49
SCLT1-205ENST00000503401 DNAJB2P25686 324 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 AXLP30530 894 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 FAM189BP81408 668 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 COASYQ13057 564 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 ZC2HC1CQ53FD0 456 aaPredicted RBP18.14■□□□□ 0.49
SCLT1-205ENST00000503401 ENGASEQ8NFI3 743 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 LPPQ93052 612 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 YME1L1Q96TA2 773 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 FGFBP2Q9BYJ0 223 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 MRPL44Q9H9J2 332 aaKnown RBP18.14■□□□□ 0.49
SCLT1-205ENST00000503401 PCDHB2Q9Y5E7 798 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 COL4A6Q14031 1691 aa18.14■□□□□ 0.49
SCLT1-205ENST00000503401 A0A1B0GUA9 196 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 MEIS3P2A8K0S8 358 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 NR1I2O75469 434 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 ARHGEF15O94989 841 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 CA3P07451 260 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 FGFR1P11362 822 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 GAP43P17677 238 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 CASP5P51878 434 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 FAM160A1Q05DH4 1040 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 EEF1DP3Q658K8 133 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 CCDC65Q8IXS2 484 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 RAD9AQ99638 391 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 TARS2Q9BW92 718 aaKnown RBP18.13■□□□□ 0.49
SCLT1-205ENST00000503401 NKX2-4Q9H2Z4 354 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 PDZD7Q9H5P4 517 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 KCNG1Q9UIX4 513 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 PCDHA11Q9Y5I1 949 aa18.13■□□□□ 0.49
SCLT1-205ENST00000503401 NPTXRO95502 500 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 STAG3L1P0CL83 205 aa18.12■□□□□ 0.49
SCLT1-205ENST00000503401 FXR1P51114 621 aaKnown RBP eCLIP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 HTRA4P83105 476 aaPredicted RBP18.12■□□□□ 0.49
SCLT1-205ENST00000503401 STRN3Q13033 797 aa18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms