RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 TMEM117Q9H0C3 514 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 PCDHA7Q9UN72 937 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 RWDD3Q9Y3V2 267 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 PCDHB2Q9Y5E7 798 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 CDH23Q9H251 3354 aa20.12■□□□□ 0.81
PDLIM7-209ENST00000503346 PHLPP2Q6ZVD8 1323 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 CNTNAP2Q9UHC6 1331 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 A0A087X0B3 334 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 NPHP3-ACAD11A0A0J9YXS1 232 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 A0A1B0GUA9 196 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 CCDC169A6NNP5 214 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 TBKBP1A7MCY6 615 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 SFI1A8K8P3 1242 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 ACKR2O00590 384 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 PRKCBP05771 671 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 ME1P48163 572 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 ADGRE1Q14246 886 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 DHX8Q14562 1220 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 PAN2Q504Q3 1202 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 EPC2Q52LR7 807 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 CLLU1OSQ5K130 101 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 TMEM192Q8IY95 271 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 RNF169Q8NCN4 708 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 CNNM3Q8NE01 707 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 RSPH1Q8WYR4 309 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 PGBD4Q96DM1 585 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 CASD1Q96PB1 797 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 GAS2L1Q99501 681 aaPredicted RBP20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 REEP2Q9BRK0 252 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 TMEM134Q9H6X4 195 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 KMT5AQ9NQR1 393 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 ARHGAP28Q9P2N2 729 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 MTUS1Q9ULD2 1270 aa20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 RBM19Q9Y4C8 960 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 MRPL42Q9Y6G3 142 aaKnown RBP20.11■□□□□ 0.81
PDLIM7-209ENST00000503346 FOSL2P15408 326 aa20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 STAT6P42226 847 aa20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 ZNF131P52739 623 aa20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 CACNB1Q02641 598 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 GIT2Q14161 759 aa20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 ABI1Q8IZP0 508 aa20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 LEO1Q8WVC0 666 aaPredicted RBP20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 PANK2Q9BZ23 570 aa20.1■□□□□ 0.81
PDLIM7-209ENST00000503346 C5orf67F2Z3F1 127 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 K7ERI5 159 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 RFXAPO00287 272 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 EDN1P05305 212 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 RB1P06400 928 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 NCLP19338 710 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 POU3F3P20264 500 aaPredicted RBP20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 BMPR1AP36894 532 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 PRPF4BQ13523 1007 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 SLC27A1Q6PCB7 646 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 SV2BQ7L1I2 683 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 FBXO22Q8NEZ5 403 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 KCNN1Q92952 543 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 CHAMP1Q96JM3 812 aa20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 EIF2AQ9BY44 585 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 LARSQ9P2J5 1176 aaKnown RBP20.09■□□□□ 0.81
PDLIM7-209ENST00000503346 TTLL13PA6NNM8 815 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 LPXNO60711 386 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 FAM13AO94988 1023 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 KRT18P05783 430 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 SMTNP53814 917 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 E2F4Q16254 413 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 RESP18Q5W5W9 173 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 AGMOQ6ZNB7 445 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 TAS1R3Q7RTX0 852 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 LRRC43Q8N309 656 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 PDILTQ8N807 584 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 SMG8Q8ND04 991 aaKnown RBP20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 TMEM161BQ8NDZ6 487 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 HELQQ8TDG4 1101 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 LPPQ93052 612 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 SPATA32Q96LK8 384 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 PLVAPQ9BX97 442 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 CUEDC2Q9H467 287 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 PARVGQ9HBI0 331 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 IPPQ9Y573 584 aa20.08■□□□□ 0.81
PDLIM7-209ENST00000503346 MEIS3P2A8K0S8 358 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 H3BNC9 293 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 N4BP3O15049 544 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 SLC16A4O15374 487 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 LIG1P18858 919 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 CTNNB1P35222 781 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 NCKAP1LP55160 1127 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 NT5DC1Q5TFE4 455 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 GLB1LQ6UWU2 654 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 LRRC55Q6ZSA7 311 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 GDPD5Q8WTR4 605 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 MRPL9Q9BYD2 267 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 SCAND2PQ9GZW5 306 aaPredicted RBP20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 PDZD7Q9H5P4 517 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 CWH43Q9H720 699 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 UBN1Q9NPG3 1134 aa20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 TYW1Q9NV66 732 aaKnown RBP20.07■□□□□ 0.8
PDLIM7-209ENST00000503346 MYMKA6NI61 221 aa20.06■□□□□ 0.8
PDLIM7-209ENST00000503346 H0YCG3 227 aa20.06■□□□□ 0.8
PDLIM7-209ENST00000503346 TBCAO75347 108 aaKnown RBP20.06■□□□□ 0.8
PDLIM7-209ENST00000503346 OFD1O75665 1012 aa20.06■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms