RNA–Protein interactions for RNA: ENST00000503291.5

CDC42SE2-206, Transcript of CDC42 small effector 2, humanhuman

TSL 1 (best) BASIC

Gene CDC42SE2, Length 2,025 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-206ENST00000503291 CCDC155Q8N6L0 562 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 P2RX5Q93086 422 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 MED15Q96RN5 788 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 EXOC7Q9UPT5 735 aa22.4■■□□□ 1.18
CDC42SE2-206ENST00000503291 ZMYM2Q9UBW7 1377 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 ACKR2O00590 384 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 TGFB1I1O43294 461 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 EDN1P05305 212 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 CCNE1P24864 410 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 BFSP2Q13515 415 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 PRMT7Q9NVM4 692 aaPredicted RBP22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 RWDD2AQ9UIY3 292 aa22.39■■□□□ 1.17
CDC42SE2-206ENST00000503291 CCDC85CA6NKD9 419 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 FGFR4P22455 802 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 FAM187BQ17R55 369 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 ANKRD40Q6AI12 368 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 TRAF7Q6Q0C0 670 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 GBP3Q9H0R5 595 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 TRIM49BA6NDI0 452 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 TTLL13PA6NNM8 815 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 RBAK-RBAKDNI3L0D1 243 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 PDXKO00764 312 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 CAVIN2O95810 425 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 AMHR2Q16671 573 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 BICD1Q96G01 975 aa22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 NOC4LQ9BVI4 516 aaKnown RBP22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 TARS2Q9BW92 718 aaKnown RBP22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 NOC2LQ9Y3T9 749 aaKnown RBP22.38■■□□□ 1.17
CDC42SE2-206ENST00000503291 PITPNM1O00562 1244 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 HNRNPDLO14979 420 aaKnown RBP22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 B4GALT5O43286 388 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 CLTBP09497 229 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 PRPF4BQ13523 1007 aaKnown RBP22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 ZCWPW2Q504Y3 356 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 PPP4R3CPQ6ZMV5 832 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 GAS2L3Q86XJ1 694 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 PRIMPOLQ96LW4 560 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 MRPL4Q9BYD3 311 aaKnown RBP22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 OSBPL7Q9BZF2 842 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 HIPK3Q9H422 1215 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 TMEM39AQ9NV64 488 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 TYW1Q9NV66 732 aaKnown RBP22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 SIP14410 1827 aa22.37■■□□□ 1.17
CDC42SE2-206ENST00000503291 TISP43B9A030 160 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 ERLIN2O94905 339 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 SELPP16109 830 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 TTI2Q6NXR4 508 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 LRRC8DQ7L1W4 858 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 CATSPER4Q7RTX7 472 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 BPIFA3Q9BQP9 254 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 TBX21Q9UL17 535 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 TRAF3IP3Q9Y228 551 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 BICDL2A1A5D9 508 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 ANKRD63C9JTQ0 380 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 PIGRP01833 764 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 SFPQP23246 707 aaKnown RBP eCLIP22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 LIG4P49917 911 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 PCBP1Q15365 356 aaKnown RBP eCLIP22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 FBXO47Q5MNV8 452 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 ZPBP2Q6X784 338 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 HS2ST1Q7LGA3 356 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 TNS4Q8IZW8 715 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 ACO2Q99798 780 aaKnown RBP22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 UMODL1Q5DID0 1318 aa22.36■■□□□ 1.17
CDC42SE2-206ENST00000503291 RPS6KA5O75582 802 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 LRRC63Q05C16 580 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 SLC39A4Q6P5W5 647 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 FAM228AQ86W67 206 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 ENOX1Q8TC92 643 aaKnown RBP22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 AGO3Q9H9G7 860 aaKnown RBP22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 CBX8Q9HC52 389 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 AGPAT3Q9NRZ7 376 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 CLIC2O15247 247 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 CALUO43852 315 aaPredicted RBP22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 TSPAN1O60635 241 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 GHRP10912 638 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 ARF4P18085 180 aaPredicted RBP22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 LPIN1Q14693 890 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 MBTPS1Q14703 1052 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 GOLGA5Q8TBA6 731 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 FAM200AQ8TCP9 573 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 TSG101Q99816 390 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 PPP1R12CQ9BZL4 782 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 SQORQ9Y6N5 450 aa22.35■■□□□ 1.17
CDC42SE2-206ENST00000503291 NCBP1Q09161 790 aaKnown RBP22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 IQCB1Q15051 598 aa22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 TMEM132AQ24JP5 1023 aa22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 DHX40Q8IX18 779 aaKnown RBP22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 AOPEPQ8N6M6 819 aa22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 CPB2Q96IY4 423 aa22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 ZBTB45Q96K62 511 aaPredicted RBP22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 DUSP9Q99956 384 aaKnown RBP22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 CNTNAP2Q9UHC6 1331 aa22.34■■□□□ 1.17
CDC42SE2-206ENST00000503291 ADSSP30520 456 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 SNRPFP62306 86 aaKnown RBP22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 NFX1Q12986 1120 aaKnown RBP22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 EDRF1Q3B7T1 1238 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 ATF7IP2Q5U623 682 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 FOXR2Q6PJQ5 311 aa22.33■■□□□ 1.17
CDC42SE2-206ENST00000503291 TSHZ1Q6ZSZ6 1077 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms