RNA–Protein interactions for RNA: ENST00000502943.1

PROM1-203, Transcript of prominin 1, humanhuman

TSL 3

Gene PROM1, Length 760 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-203ENST00000502943 LSM14BQ9BX40 385 aaKnown RBP5.22□□□□□ -1.57
PROM1-203ENST00000502943 ENKD1Q9H0I2 346 aa5.22□□□□□ -1.57
PROM1-203ENST00000502943 FRMD4BQ9Y2L6 1034 aa5.22□□□□□ -1.57
PROM1-203ENST00000502943 APPP05067 770 aa5.21□□□□□ -1.58
PROM1-203ENST00000502943 GDF7Q7Z4P5 450 aa5.21□□□□□ -1.58
PROM1-203ENST00000502943 SIMC1Q8NDZ2 872 aa5.21□□□□□ -1.58
PROM1-203ENST00000502943 TUBGCP5Q96RT8 1024 aa5.21□□□□□ -1.58
PROM1-203ENST00000502943 GMLQ99445 158 aa5.21□□□□□ -1.58
PROM1-203ENST00000502943 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.21□□□□□ -1.58
PROM1-203ENST00000502943 TCRBV16S1A1N1A0A5B0 115 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 UNC119BA6NIH7 251 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 LEFTY2O00292 366 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 RNASET2O00584 256 aaKnown RBP5.2□□□□□ -1.58
PROM1-203ENST00000502943 DNAJC6O75061 913 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 CXCR5P32302 372 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 IQSEC1Q6DN90 963 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 FGD2Q7Z6J4 655 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 RPGRQ92834 1020 aaKnown RBP5.2□□□□□ -1.58
PROM1-203ENST00000502943 UIMC1Q96RL1 719 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 LRFN3Q9BTN0 628 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 TEX101Q9BY14 249 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 DKK2Q9UBU2 259 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 CHST2Q9Y4C5 530 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 CEP164Q9UPV0 1460 aa5.2□□□□□ -1.58
PROM1-203ENST00000502943 MYADML2A6NDP7 307 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 CASRP41180 1078 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 BCAR1P56945 870 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 BEAN1Q3B7T3 259 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 TRIM61Q5EBN2 209 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 METTL24Q5JXM2 366 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 HDGFL2Q7Z4V5 671 aaPredicted RBP5.19□□□□□ -1.58
PROM1-203ENST00000502943 BRAPQ7Z569 592 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 FAM83AQ86UY5 434 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 GLB1L3Q8NCI6 653 aaPredicted RBP5.19□□□□□ -1.58
PROM1-203ENST00000502943 COQ10AQ96MF6 247 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 PDCD2LQ9BRP1 358 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 SOX7Q9BT81 388 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 SPATA5L1Q9BVQ7 753 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 MTG2Q9H4K7 406 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 KDM2BQ8NHM5 1336 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 ARAP1Q96P48 1450 aa5.19□□□□□ -1.58
PROM1-203ENST00000502943 A0A0A6YYJ9 748 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 NPTXRO95502 500 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 C1RP00736 705 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 HKR1P10072 659 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 GAAP10253 952 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 TCF3P15923 654 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 PTX3P26022 381 aaPredicted RBP5.18□□□□□ -1.58
PROM1-203ENST00000502943 MECP2P51608 486 aaKnown RBP5.18□□□□□ -1.58
PROM1-203ENST00000502943 RNASE9P60153 205 aaKnown RBP5.18□□□□□ -1.58
PROM1-203ENST00000502943 ERCC6LQ2NKX8 1250 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 LCE1AQ5T7P2 110 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 XYLT1Q86Y38 959 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 SLC43A3Q8NBI5 491 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 PIK3C3Q8NEB9 887 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 OR5M3Q8NGP4 307 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 NELL1Q92832 810 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 PITHD1Q9GZP4 211 aaPredicted RBP5.18□□□□□ -1.58
PROM1-203ENST00000502943 PCIF1Q9H4Z3 704 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 ALG13Q9NP73 1137 aaKnown RBP5.18□□□□□ -1.58
PROM1-203ENST00000502943 RNF7Q9UBF6 113 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 SYNPO2Q9UMS6 1093 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 SMARCA4P51532 1647 aa5.18□□□□□ -1.58
PROM1-203ENST00000502943 NRP1O14786 923 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 ALDH1A2O94788 518 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 CPEB3Q8NE35 698 aaKnown RBP5.17□□□□□ -1.58
PROM1-203ENST00000502943 ASB10Q8WXI3 467 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 DCLRE1CQ96SD1 692 aaKnown RBP5.17□□□□□ -1.58
PROM1-203ENST00000502943 OSBPL6Q9BZF3 934 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 CCDC113Q9H0I3 377 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 ACSS2Q9NR19 701 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 HDAC5Q9UQL6 1122 aa5.17□□□□□ -1.58
PROM1-203ENST00000502943 TNPO3Q9Y5L0 923 aaKnown RBP5.17□□□□□ -1.58
PROM1-203ENST00000502943 FANCD2Q9BXW9 1451 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 GAGE12BA1L429 117 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 PIPSLA2A3N6 862 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 GAGE12HA6NDE8 117 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 M0R2C6 588 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 OPHN1O60890 802 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 FSBPO95073 299 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 ZSCAN20P17040 1043 aaPredicted RBP5.16□□□□□ -1.58
PROM1-203ENST00000502943 ELLP55199 621 aaPredicted RBP5.16□□□□□ -1.58
PROM1-203ENST00000502943 GUCY1B3Q02153 619 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 ADCY2Q08462 1091 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 TP53BP2Q13625 1128 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 LONRF2Q1L5Z9 754 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 UNQ6494/PRO21346Q6UXR6 183 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 KANSL1Q7Z3B3 1105 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 SYT12Q8IV01 421 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 CKAP2LQ8IYA6 745 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 IL17RAQ96F46 866 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 ADAM2Q99965 735 aa5.16□□□□□ -1.58
PROM1-203ENST00000502943 SETD1BQ9UPS6 1966 aaKnown RBP5.15□□□□□ -1.58
PROM1-203ENST00000502943 PROB1E7EW31 1015 aa5.15□□□□□ -1.59
PROM1-203ENST00000502943 APOL3O95236 402 aa5.15□□□□□ -1.59
PROM1-203ENST00000502943 BMPR1AP36894 532 aa5.15□□□□□ -1.59
PROM1-203ENST00000502943 NHLH2Q02577 135 aa5.15□□□□□ -1.59
PROM1-203ENST00000502943 FOXF2Q12947 444 aa5.15□□□□□ -1.59
PROM1-203ENST00000502943 MRPL49Q13405 166 aaKnown RBP5.15□□□□□ -1.59
PROM1-203ENST00000502943 EPHA7Q15375 998 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms