RNA–Protein interactions for RNA: ENST00000502781.5

LSM6-202, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 1,352 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-202ENST00000502781 GOLPH3LQ9H4A5 285 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 RNF216Q9NWF9 866 aaPredicted RBP27.69■■■□□ 2.02
LSM6-202ENST00000502781 TMEM161AQ9NX61 479 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 MSRAQ9UJ68 235 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 PHLPP2Q6ZVD8 1323 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 CNTNAP2Q9UHC6 1331 aa27.69■■■□□ 2.02
LSM6-202ENST00000502781 A0A1B0GUA9 196 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 FRMD3A2A2Y4 597 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 SLC16A4O15374 487 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 ZNF623O75123 536 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 EDN1P05305 212 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 PRKCBP05771 671 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 SLFN14P0C7P3 912 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 STAG3L1P0CL83 205 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 MYOGP15173 224 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 NDUFA8P51970 172 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 TWF2Q6IBS0 349 aaKnown RBP27.68■■■□□ 2.02
LSM6-202ENST00000502781 ECHDC2Q86YB7 292 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 FSIP1Q8NA03 581 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 SP7Q8TDD2 431 aaPredicted RBP27.68■■■□□ 2.02
LSM6-202ENST00000502781 STAMQ92783 540 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 ZNF689Q96CS4 500 aaPredicted RBP27.68■■■□□ 2.02
LSM6-202ENST00000502781 TRIM9Q9C026 710 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 USP25Q9UHP3 1055 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 INSL6Q9Y581 213 aa27.68■■■□□ 2.02
LSM6-202ENST00000502781 TTLL13PA6NNM8 815 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 K7ERI5 159 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 DGKIO75912 1065 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 ATF7P17544 494 aaPredicted RBP27.67■■■□□ 2.02
LSM6-202ENST00000502781 AMPD3Q01432 767 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 NCBP1Q09161 790 aaKnown RBP27.67■■■□□ 2.02
LSM6-202ENST00000502781 NOTUMQ6P988 496 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 MYCT1Q8N699 235 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 TMEM87AQ8NBN3 555 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 FAM105AQ9NUU6 356 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 SERTAD1Q9UHV2 236 aa27.67■■■□□ 2.02
LSM6-202ENST00000502781 TMEM265A0A087WTH1 108 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 TRAK2O60296 914 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 MAPTP10636 758 aaKnown RBP27.66■■■□□ 2.02
LSM6-202ENST00000502781 SCP2P22307 547 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 SYKP43405 635 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 RAB27AP51159 221 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 LONRF3Q496Y0 759 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 TIFAQ96CG3 184 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 CPB2Q96IY4 423 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 C7orf25Q9BPX7 421 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 SEL1LQ9UBV2 794 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 PCDHB7Q9Y5E2 793 aa27.66■■■□□ 2.02
LSM6-202ENST00000502781 COL4A6Q14031 1691 aa27.65■■■□□ 2.02
LSM6-202ENST00000502781 H0YCG3 227 aa27.65■■■□□ 2.02
LSM6-202ENST00000502781 EOMESO95936 686 aa27.65■■■□□ 2.02
LSM6-202ENST00000502781 PRPF4BQ13523 1007 aaKnown RBP27.65■■■□□ 2.02
LSM6-202ENST00000502781 CLEC17AQ6ZS10 378 aa27.65■■■□□ 2.02
LSM6-202ENST00000502781 HAUS6Q7Z4H7 955 aa27.65■■■□□ 2.02
LSM6-202ENST00000502781 NKX2-4Q9H2Z4 354 aa27.65■■■□□ 2.02
LSM6-202ENST00000502781 LCHNA4D1U4 455 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 CA3P07451 260 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 SKIP12755 728 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 GAP43P17677 238 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 CSPP1Q1MSJ5 1256 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 NT5DC1Q5TFE4 455 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 MRPL10Q7Z7H8 261 aaKnown RBP27.64■■■□□ 2.02
LSM6-202ENST00000502781 CEP57L1Q8IYX8 460 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 YME1L1Q96TA2 773 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 ST6GALNAC4Q9H4F1 302 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 ZHX3Q9H4I2 956 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 RNF19AQ9NV58 838 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 LRFN2Q9ULH4 789 aa27.64■■■□□ 2.02
LSM6-202ENST00000502781 MYH11P35749 1972 aa27.64■■■□□ 2.01
LSM6-202ENST00000502781 GOLGA6L4A6NEF3 574 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 ARHGEF15O94989 841 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 SLC27A1Q6PCB7 646 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 SFR1Q86XK3 245 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 SLC17A8Q8NDX2 589 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 EIF2AQ9BY44 585 aaKnown RBP27.63■■■□□ 2.01
LSM6-202ENST00000502781 OLFML3Q9NRN5 406 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 USP20Q9Y2K6 914 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 PCDHB2Q9Y5E7 798 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 GBF1Q92538 1859 aa27.63■■■□□ 2.01
LSM6-202ENST00000502781 LIG1P18858 919 aa27.62■■■□□ 2.01
LSM6-202ENST00000502781 FAM178BQ8IXR5 827 aa27.62■■■□□ 2.01
LSM6-202ENST00000502781 SMG8Q8ND04 991 aaKnown RBP27.62■■■□□ 2.01
LSM6-202ENST00000502781 ENGASEQ8NFI3 743 aa27.62■■■□□ 2.01
LSM6-202ENST00000502781 PAGE5Q96GU1 130 aa27.62■■■□□ 2.01
LSM6-202ENST00000502781 PDZD7Q9H5P4 517 aa27.62■■■□□ 2.01
LSM6-202ENST00000502781 ZNF202O95125 648 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 IDEP14735 1019 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 GTF2BQ00403 316 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 TAP1Q03518 808 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 CDR2LQ86X02 465 aaPredicted RBP27.61■■■□□ 2.01
LSM6-202ENST00000502781 FMR1NBQ8N0W7 255 aaPredicted RBP27.61■■■□□ 2.01
LSM6-202ENST00000502781 ACO2Q99798 780 aaKnown RBP27.61■■■□□ 2.01
LSM6-202ENST00000502781 STRA6Q9BX79 667 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 TTYH1Q9H313 450 aaPredicted RBP27.61■■■□□ 2.01
LSM6-202ENST00000502781 SLC28A3Q9HAS3 691 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 PTPRHQ9HD43 1115 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 PANK4Q9NVE7 773 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 TNFSF13BQ9Y275 285 aa27.61■■■□□ 2.01
LSM6-202ENST00000502781 LINC01553A4QN01 128 aa27.6■■■□□ 2.01
LSM6-202ENST00000502781 K7ENM7 598 aa27.6■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms