RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 CHMP6Q96FZ7 201 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TUBB2BQ9BVA1 445 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZHX3Q9H4I2 956 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 NMRK1Q9NWW6 199 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ARPP21Q9UBL0 812 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 NUMBLQ9Y6R0 609 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TJP1Q07157 1748 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CLRN2A0PK11 232 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 IFRD1O00458 451 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 WNT7AO00755 349 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PRPF3O43395 683 aaKnown RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 FOSP01100 380 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 HNRNPCP07910 306 aaKnown RBP eCLIP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PSMC4P43686 418 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RTP1P59025 263 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 GSTM4Q03013 218 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 NFX1Q12986 1120 aaKnown RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF211Q13398 564 aaPredicted RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ERMARDQ5T6L9 678 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TMEM53Q6P2H8 277 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 C16orf54Q6UWD8 224 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ASRGL1Q7L266 308 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TMTC1Q8IUR5 882 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 KLHL7Q8IXQ5 586 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PRR7Q8TB68 274 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 TAF4BQ92750 862 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 DUSP9Q99956 384 aaKnown RBP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 BRIP1Q9BX63 1249 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 OSBPL2Q9H1P3 480 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 BLZF1Q9H2G9 400 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ARHGEF3Q9NR81 526 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 RNF181Q9P0P0 153 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 PIM2Q9P1W9 311 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 CTNND2Q9UQB3 1225 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 ZNF711Q9Y462 761 aa6.22□□□□□ -1.41
SOX2-OT-218ENST00000498731 BTAF1O14981 1849 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 RTL9Q8NET4 1388 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 PIP5K1CO60331 668 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 ATP9AO75110 1047 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 YEATS4O95619 227 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 VIL1P09327 827 aaKnown RBP6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 VDRP11473 427 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 VEGFAP15692 232 aaPredicted RBP6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 PDE6CP51160 858 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 CCR3P51677 355 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 PMS1P54277 932 aaKnown RBP6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 KLC1Q07866 573 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 LBRQ14739 615 aaKnown RBP6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 SGSM1Q2NKQ1 1148 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 GALNTL6Q49A17 601 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 SCUBE1Q8IWY4 988 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 SLC7A5P1Q8MH63 180 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 HSPBAP1Q96EW2 488 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 AGAP3Q96P47 875 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 TUBGCP5Q96RT8 1024 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 NAA15Q9BXJ9 866 aaKnown RBP6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 AGXT2Q9BYV1 514 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 PFDN4Q9NQP4 134 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 FAM217BQ9NTX9 383 aaPredicted RBP6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 CEP72Q9P209 647 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 FBXL5Q9UKA1 691 aa6.21□□□□□ -1.41
SOX2-OT-218ENST00000498731 NUP188Q5SRE5 1749 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 MYH4Q9Y623 1939 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 HMGB1P1B2RPK0 211 aaPredicted RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 NPR1P16066 1061 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 IFNAR1P17181 557 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 DESP17661 470 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 SSTR3P32745 418 aaPredicted RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZYXQ15942 572 aaKnown RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF394Q53GI3 561 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 SOGA3Q5TF21 947 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 CGB2Q6NT52 195 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 SLC2A7Q6PXP3 512 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 POTEHQ6S545 545 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 LCA5Q86VQ0 697 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 NMD3Q96D46 503 aaKnown RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 MASTLQ96GX5 879 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 CEP295NLQ96MC4 621 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 TLR10Q9BXR5 811 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 KMT5AQ9NQR1 393 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 PCDHB6Q9Y5E3 794 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 EPHB6O15197 1021 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 GRIN3BO60391 1043 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 LILRB3O75022 631 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 POU3F3P20264 500 aaPredicted RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 KCNA3P22001 575 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 MCM3P25205 808 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 KRT2P35908 639 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 CDK8P49336 464 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 TOB1P50616 345 aaPredicted RBP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 ECM1Q16610 540 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 VWA3BQ502W6 1294 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 NOSTRINQ8IVI9 506 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 CD302Q8IX05 232 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 MGARPQ8TDB4 240 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 MTMR8Q96EF0 704 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 EPSTI1Q96J88 318 aa6.21□□□□□ -1.42
SOX2-OT-218ENST00000498731 ZNF287Q9HBT7 754 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms