RNA–Protein interactions for RNA: ENST00000498544.5

ECHDC2-220, Transcript of enoyl-CoA hydratase domain containing 2, humanhuman

TSL 2

Gene ECHDC2, Length 985 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC2-220ENST00000498544 TSPYL2Q9H2G4 693 aaPredicted RBP19.41■□□□□ 0.7
ECHDC2-220ENST00000498544 PIN4Q9Y237 131 aaKnown RBP19.41■□□□□ 0.7
ECHDC2-220ENST00000498544 FNDC1Q4ZHG4 1894 aaPredicted RBP19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 DENND3A2RUS2 1198 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 ACKR2O00590 384 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 CASP1P29466 404 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 KCNJ6P48051 423 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 WDR5P61964 334 aaKnown RBP19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 EHHADHQ08426 723 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 DPYDQ12882 1025 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 DSC3Q14574 896 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 C9orf50Q5SZB4 431 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 RASIP1Q5U651 963 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 HVCN1Q96D96 273 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 CCDC51Q96ER9 411 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 RNPC3Q96LT9 517 aaKnown RBP19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 MRPL44Q9H9J2 332 aaKnown RBP19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 C1orf112Q9NSG2 853 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 CITO14578 2027 aa19.4■□□□□ 0.7
ECHDC2-220ENST00000498544 A0A1W2PPC1 479 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 ZBBXA8MT70 800 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 ZSCAN20P17040 1043 aaPredicted RBP19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 HOXA11P31270 313 aaPredicted RBP19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 STRN3Q13033 797 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 PRPF4BQ13523 1007 aaKnown RBP19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 ALCAMQ13740 583 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 SHHQ15465 462 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 NOTUMQ6P988 496 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 TDHQ8IZJ6 230 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 LINC01599Q8WXQ3 324 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 ADAM2Q99965 735 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 TRAIPQ9BWF2 469 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 RGS18Q9NS28 235 aa19.39■□□□□ 0.69
ECHDC2-220ENST00000498544 LOC101059915A0A1B0GWI6 518 aaPredicted RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 B4GALT5O43286 388 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 KLRC4O43908 158 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 MGEA5O60502 916 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 AMHP03971 560 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 RPN1P04843 607 aaKnown RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 PRR29P0C7W0 189 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 ARF4P18085 180 aaPredicted RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 NMT1P30419 496 aaKnown RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 GTF2BQ00403 316 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 FAM26FQ5R3K3 315 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 STXBP4Q6ZWJ1 553 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 SLC24A5Q71RS6 500 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 TAS1R3Q7RTX0 852 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 ZNF720Q7Z2F6 126 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 CCDC47Q96A33 483 aaKnown RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 SLC9A7Q96T83 725 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 MRPL4Q9BYD3 311 aaKnown RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 TRIOBPQ9H2D6 2365 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 EXOC1Q9NV70 894 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 RNF216Q9NWF9 866 aaPredicted RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 CXXC1Q9P0U4 656 aaPredicted RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 COLQQ9Y215 455 aaPredicted RBP19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 SLC4A7Q9Y6M7 1214 aa19.38■□□□□ 0.69
ECHDC2-220ENST00000498544 TDRD15B5MCY1 1934 aaKnown RBP19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 RALGAPA2Q2PPJ7 1873 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 LAMA2P24043 3122 aaKnown RBP19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 A0A1B0GUA9 196 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 RBAK-RBAKDNI3L0D1 243 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 ENPP3O14638 875 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 PPP1R37O75864 691 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 MCM4P33991 863 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 RAB27AP51159 221 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 PNOCQ13519 176 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 TWF2Q6IBS0 349 aaKnown RBP19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 STRA6Q9BX79 667 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 TBC1D7Q9P0N9 293 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 TBX20Q9UMR3 447 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 TRIP11Q15643 1979 aa19.37■□□□□ 0.69
ECHDC2-220ENST00000498544 COL4A6Q14031 1691 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 UBE4BO95155 1302 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 C9IYK1 514 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 N4BP3O15049 544 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 SMC2O95347 1197 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 GCNT3O95395 438 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 MBD3O95983 291 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 EDN1P05305 212 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 SKIP12755 728 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 PSMD2Q13200 908 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 KCNB1Q14721 858 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 TMEM132AQ24JP5 1023 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 KMT5BQ4FZB7 885 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 SLC27A1Q6PCB7 646 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 ZPBP2Q6X784 338 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 RTN4RL1Q86UN2 441 aaPredicted RBP19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 MAP4K3Q8IVH8 894 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 PHOSPHO2Q8TCD6 241 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 CPB2Q96IY4 423 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 PCDHB13Q9Y5F0 798 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 PDCD11Q14690 1871 aaKnown RBP19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 NLRC5Q86WI3 1866 aa19.36■□□□□ 0.69
ECHDC2-220ENST00000498544 A0A0U1RQF3 1178 aa19.35■□□□□ 0.69
ECHDC2-220ENST00000498544 HNRNPDLO14979 420 aaKnown RBP19.35■□□□□ 0.69
ECHDC2-220ENST00000498544 EIF3DO15371 548 aaKnown RBP eCLIP19.35■□□□□ 0.69
ECHDC2-220ENST00000498544 RHOBTB3O94955 611 aa19.35■□□□□ 0.69
ECHDC2-220ENST00000498544 SARSP49591 514 aaKnown RBP19.35■□□□□ 0.69
ECHDC2-220ENST00000498544 CASP5P51878 434 aa19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms