RNA–Protein interactions for RNA: ENST00000498474.2

PUDP-205, Transcript of pseudouridine 5'-phosphatase, humanhuman

TSL 4

Gene PUDP, Length 1,040 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUDP-205ENST00000498474 KIAA1671Q9BY89 1806 aa9.03□□□□□ -0.96
PUDP-205ENST00000498474 IGLV3-22A0A075B6J6 115 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 SERTM1A2A2V5 107 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 MBLAC1A4D2B0 266 aaPredicted RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 MAFGO15525 162 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 DHX15O43143 795 aaKnown RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 POU3F3P20264 500 aaPredicted RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 CD52P31358 61 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 STAT5BP51692 787 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 ERVK-21P61565 698 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 MRPS5P82675 430 aaKnown RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 HTRA4P83105 476 aaPredicted RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 TMEM266Q2M3C6 531 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 FBXO47Q5MNV8 452 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 ABHD15Q6UXT9 468 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 RUFY3Q7L099 469 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 CCDC60Q8IWA6 550 aaPredicted RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 ATXN2LQ8WWM7 1075 aaKnown RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 LINC01599Q8WXQ3 324 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 TGS1Q96RS0 853 aaKnown RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 YME1L1Q96TA2 773 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 SLC30A3Q99726 388 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 AGXT2Q9BYV1 514 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 ZMYND12Q9H0C1 365 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 TSPAN10Q9H1Z9 355 aaPredicted RBP9.02□□□□□ -0.97
PUDP-205ENST00000498474 AZI2Q9H6S1 392 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 INSL6Q9Y581 213 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 NFASCO94856 1347 aa9.02□□□□□ -0.97
PUDP-205ENST00000498474 CCDC196A0A1B0GTZ2 297 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 hCG_1984214I3L0E3 225 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 ENPP3O14638 875 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 EFCAB14O75071 495 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 REC8O95072 547 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 ATG7O95352 703 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 GATMP50440 423 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 MRPS6P82932 125 aaKnown RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 AKAP17AQ02040 695 aaKnown RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 AP3B2Q13367 1082 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 EPC2Q52LR7 807 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 PRR16Q569H4 304 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 SWSAP1Q6NVH7 229 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 RTN4RL1Q86UN2 441 aaPredicted RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 REXO1Q8N1G1 1221 aaKnown RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 ZNF713Q8N859 430 aaPredicted RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 CRYGNQ8WXF5 182 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 ZNF668Q96K58 619 aaPredicted RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 UHRF1Q96T88 793 aaPredicted RBP9.01□□□□□ -0.97
PUDP-205ENST00000498474 ZNF577Q9BSK1 485 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 PLVAPQ9BX97 442 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 C6orf50Q9HD87 102 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 GINS2Q9Y248 185 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 HCN4Q9Y3Q4 1203 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 TRIOO75962 3097 aa9.01□□□□□ -0.97
PUDP-205ENST00000498474 NID2Q14112 1375 aa9□□□□□ -0.97
PUDP-205ENST00000498474 RALGAPA2Q2PPJ7 1873 aa9□□□□□ -0.97
PUDP-205ENST00000498474 IGKV6D-21A0A0A0MT36 114 aa9□□□□□ -0.97
PUDP-205ENST00000498474 RRN3P2A6NIE6 340 aa9□□□□□ -0.97
PUDP-205ENST00000498474 ZBTB42B2RXF5 422 aa9□□□□□ -0.97
PUDP-205ENST00000498474 IPO5O00410 1097 aaKnown RBP9□□□□□ -0.97
PUDP-205ENST00000498474 PIK3R2O00459 728 aa9□□□□□ -0.97
PUDP-205ENST00000498474 CHMP2AO43633 222 aa9□□□□□ -0.97
PUDP-205ENST00000498474 CAND2O75155 1236 aa9□□□□□ -0.97
PUDP-205ENST00000498474 CYP3A4P08684 503 aa9□□□□□ -0.97
PUDP-205ENST00000498474 IFNAR1P17181 557 aa9□□□□□ -0.97
PUDP-205ENST00000498474 KLRC1P26715 233 aa9□□□□□ -0.97
PUDP-205ENST00000498474 PSMA5P28066 241 aa9□□□□□ -0.97
PUDP-205ENST00000498474 RCAN1P53805 252 aa9□□□□□ -0.97
PUDP-205ENST00000498474 XP32Q5T750 250 aa9□□□□□ -0.97
PUDP-205ENST00000498474 TAF2Q6P1X5 1199 aa9□□□□□ -0.97
PUDP-205ENST00000498474 MTHFD1LQ6UB35 978 aa9□□□□□ -0.97
PUDP-205ENST00000498474 PLPPR4Q7Z2D5 763 aa9□□□□□ -0.97
PUDP-205ENST00000498474 RSPH3Q86UC2 560 aa9□□□□□ -0.97
PUDP-205ENST00000498474 TMEM192Q8IY95 271 aa9□□□□□ -0.97
PUDP-205ENST00000498474 LENG9Q96B70 501 aa9□□□□□ -0.97
PUDP-205ENST00000498474 HSH2DQ96JZ2 352 aa9□□□□□ -0.97
PUDP-205ENST00000498474 MDFIQ99750 246 aa9□□□□□ -0.97
PUDP-205ENST00000498474 ZNF302Q9NR11 478 aa9□□□□□ -0.97
PUDP-205ENST00000498474 GJB4Q9NTQ9 266 aa9□□□□□ -0.97
PUDP-205ENST00000498474 NOP53Q9NZM5 478 aaKnown RBP9□□□□□ -0.97
PUDP-205ENST00000498474 PADI3Q9ULW8 664 aa9□□□□□ -0.97
PUDP-205ENST00000498474 PCDHA2Q9Y5H9 948 aa9□□□□□ -0.97
PUDP-205ENST00000498474 CYP46A1Q9Y6A2 500 aa9□□□□□ -0.97
PUDP-205ENST00000498474 COL4A6Q14031 1691 aa9□□□□□ -0.97
PUDP-205ENST00000498474 ELOA3CA0A087WX78 387 aaPredicted RBP8.99□□□□□ -0.97
PUDP-205ENST00000498474 ESYT2A0FGR8 921 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 ELOA3DA6NLF2 546 aaPredicted RBP8.99□□□□□ -0.97
PUDP-205ENST00000498474 MSH4O15457 936 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 MGEA5O60502 916 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 NEFLP07196 543 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 NLRP5P59047 1200 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 SSRP1Q08945 709 aaKnown RBP8.99□□□□□ -0.97
PUDP-205ENST00000498474 GPM6BQ13491 265 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 ELOA3BQ3SY89 546 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 PAN2Q504Q3 1202 aaKnown RBP8.99□□□□□ -0.97
PUDP-205ENST00000498474 FAM160B1Q5W0V3 765 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 TSHZ1Q6ZSZ6 1077 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 NIPA1Q7RTP0 329 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 RAB44Q7Z6P3 723 aaPredicted RBP8.99□□□□□ -0.97
PUDP-205ENST00000498474 RPAINQ86UA6 219 aa8.99□□□□□ -0.97
PUDP-205ENST00000498474 CKAP2LQ8IYA6 745 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms