RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, human

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HMGXB4-208	ENST00000498325	GML	Q99445	158 aa		6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	MAP3K14	Q99558	947 aa		6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	P2RX7	Q99572	595 aa	Known RBP	6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	IDI2	Q9BXS1	227 aa		6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	OSBPL5	Q9H0X9	879 aa	Predicted RBP	6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	TTYH1	Q9H313	450 aa	Predicted RBP	6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	KAT14	Q9H8E8	782 aa		6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	SP110	Q9HB58	689 aa		6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	CFAP45	Q9UL16	551 aa		6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	DDX49	Q9Y6V7	483 aa	Known RBP	6.09	□□□□□ -1.43
HMGXB4-208	ENST00000498325	MYH1	P12882	1939 aa		6.09	□□□□□ -1.44
HMGXB4-208	ENST00000498325	MYO1B	O43795	1136 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	DEXI	O95424	95 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	MBD3	O95983	291 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TFRC	P02786	760 aa	Known RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FDPS	P14324	419 aa	Known RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FOSL2	P15408	326 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	KIF5B	P33176	963 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	MRE11	P49959	708 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	KRT85	P78386	507 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TAF1C	Q15572	869 aa	Predicted RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	NTRK3	Q16288	839 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	MAP3K11	Q16584	847 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	KLHL40	Q2TBA0	621 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	HDX	Q7Z353	690 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	RAB11FIP4	Q86YS3	637 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	ZSCAN29	Q8IWY8	852 aa	Predicted RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	CCDC144CP	Q8IYA2	1237 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FAM43A	Q8N2R8	423 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	CRACR2B	Q8N4Y2	399 aa	Predicted RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	OXR1	Q8N573	874 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PIWIL2	Q8TC59	973 aa	Known RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	BRI3BP	Q8WY22	251 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	CCDC17	Q96LX7	622 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	ZNF396	Q96N95	335 aa	Predicted RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TRAIP	Q9BWF2	469 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	C1QTNF1	Q9BXJ1	281 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SLC26A6	Q9BXS9	759 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	RNF26	Q9BY78	433 aa	Predicted RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	WNT10A	Q9GZT5	417 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SCAND2P	Q9GZW5	306 aa	Predicted RBP	6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	LMBRD1	Q9NUN5	540 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PI4KB	Q9UBF8	816 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SERPINB13	Q9UIV8	391 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	CDK5RAP2	Q96SN8	1893 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FOCAD	Q5VW36	1801 aa		6.08	□□□□□ -1.44
HMGXB4-208	ENST00000498325	ALPK3	Q96L96	1907 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PSME4	Q14997	1843 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	WASH4P	A8MWX3	477 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SMIM22	K7EJ46	135 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PRPF3	O43395	683 aa	Known RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TOP1	P11387	765 aa	Known RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	RXRA	P19793	462 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PRMT2	P55345	433 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	GABPA	Q06546	454 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TROAP	Q12815	778 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	REST	Q13127	1097 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	GNL2	Q13823	731 aa	Known RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SAFB	Q15424	915 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	RASIP1	Q5U651	963 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FKBP1C	Q5VVH2	108 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PRAMEF13	Q5VWM6	474 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	BRAP	Q7Z569	592 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FERMT3	Q86UX7	667 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	HID1	Q8IV36	788 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TMEM87A	Q8NBN3	555 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	C3orf58	Q8NDZ4	430 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	FBXO18	Q8NFZ0	1043 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SYAP1	Q96A49	352 aa	Predicted RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	BORCS6	Q96GS4	357 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	PRMT6	Q96LA8	375 aa	Predicted RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	DEFB118	Q96PH6	123 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	UHRF1	Q96T88	793 aa	Predicted RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	LZTS2	Q9BRK4	669 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	ALG1	Q9BT22	464 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	MYL10	Q9BUA6	226 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SGPP1	Q9BX95	441 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	XYLT2	Q9H1B5	865 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	EPHX3	Q9H6B9	360 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	ZNF552	Q9H707	407 aa	Predicted RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TDRD3	Q9H7E2	651 aa	Known RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	GCM1	Q9NP62	436 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	DDX4	Q9NQI0	724 aa	Known RBP	6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SRRD	Q9UH36	339 aa		6.07	□□□□□ -1.44
HMGXB4-208	ENST00000498325	ECM29	Q5VYK3	1845 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	SCN9A	Q15858	1988 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	GOLGA6L4	A6NEF3	574 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	WNT10B	O00744	389 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	NMT2	O60551	498 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	DTNB	O60941	627 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	CST3	P01034	146 aa	Predicted RBP	6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	CELA3B	P08861	270 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TPP2	P29144	1249 aa	Predicted RBP	6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TNNI2	P48788	182 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	UBE2H	P62256	183 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	NFKB2	Q00653	900 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	GUCY1B3	Q02153	619 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TCP10	Q12799	353 aa		6.06	□□□□□ -1.44
HMGXB4-208	ENST00000498325	TIGD5	Q53EQ6	642 aa		6.06	□□□□□ -1.44

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