RNA–Protein interactions for RNA: ENST00000497933.1

LRRC55-201, Transcript of leucine rich repeat containing 55, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRRC55, Length 5,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC55-201ENST00000497933 SNAP23O00161 211 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 PRR29P0C7W0 189 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 SNRNP48Q6IEG0 339 aaKnown RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 CRAMP1Q96RY5 1269 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 ZBTB18Q99592 522 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 SLITRK6Q9H5Y7 841 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 RNF146Q9NTX7 359 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 ARHGEF9O43307 516 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 P4HBP07237 508 aaKnown RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 HDAC4P56524 1084 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 GFPT1Q06210 699 aaPredicted RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 ARL13BQ3SXY8 428 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 RASGRP2Q7LDG7 609 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 GDAQ9Y2T3 454 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 NRKQ7Z2Y5 1582 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 LAMC1P11047 1609 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 NBPF26B4DH59 902 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 CLDN3O15551 220 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 ANXA13P27216 316 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 CHRNA3P32297 505 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 PHKA2P46019 1235 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 TMEM154Q6P9G4 183 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 ELMSAN1Q6PJG2 1045 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 PADI6Q6TGC4 694 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 NBPF15Q8N660 670 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 RNF139Q8WU17 664 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 HEXIM2Q96MH2 286 aaKnown RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 PAIP2BQ9ULR5 123 aaKnown RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 G3BP2Q9UN86 482 aaKnown RBP12□□□□□ -0.49
LRRC55-201ENST00000497933 FIS1Q9Y3D6 152 aa12□□□□□ -0.49
LRRC55-201ENST00000497933 LRRC53A6NM62 1247 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP11P51784 963 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 RGS9BPQ6ZS82 235 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 RAD54LQ92698 747 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 CYFIP2Q96F07 1278 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 FUT8Q9BYC5 575 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 ING2Q9H160 280 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 SUCLA2Q9P2R7 463 aaPredicted RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 ARFIP2P53365 341 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 GPSM2P81274 684 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 ERICH1Q86X53 443 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 NOC2LQ9Y3T9 749 aaKnown RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 SYF2O95926 243 aaKnown RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 CD58P19256 250 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 OSTNP61366 133 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 C4orf50Q6ZRC1 276 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 CATSPER1Q8NEC5 780 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 C2orf40Q9H1Z8 148 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 RAVER2Q9HCJ3 691 aaKnown RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 DNAJC17Q9NVM6 304 aaKnown RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 TTC26A0AVF1 554 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L15C9J2P7 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L13C9JLJ4 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L11C9JVI0 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L18D6R9N7 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L22D6RA61 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L17D6RBQ6 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L19D6RCP7 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L20D6RJB6 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 ZFXP17010 805 aaPredicted RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 QARSP47897 775 aaKnown RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 NEK2P51955 445 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L24Q0WX57 530 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 TFDP2Q14188 446 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 SF3B3Q15393 1217 aaKnown RBP11.99□□□□□ -0.49
LRRC55-201ENST00000497933 USP17L6PQ6QN14 398 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 DSTYKQ6XUX3 929 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 SPATA21Q7Z572 469 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 ICA1LQ8NDH6 482 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 HIPK4Q8NE63 616 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 ARL2BPQ9Y2Y0 163 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 SETBP1Q9Y6X0 1596 aa11.99□□□□□ -0.49
LRRC55-201ENST00000497933 CROCC2H7BZ55 1655 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SLC44A5Q8NCS7 719 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 PIGOQ8TEQ8 1089 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 PRMT1Q99873 361 aaKnown RBP11.98□□□□□ -0.49
LRRC55-201ENST00000497933 MLXIPLQ9NP71 852 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SNX12Q9UMY4 172 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 TRIM49BA6NDI0 452 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 POTEMA6NI47 508 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 CCDC22O60826 627 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 ZRANB2O95218 330 aaKnown RBP eCLIP11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SNAP25P60880 206 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 GPC5P78333 572 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 MRPS35P82673 323 aaKnown RBP11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SPP2Q13103 211 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SLC12A1Q13621 1099 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 TTLL4Q14679 1199 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 LRRC14Q15048 493 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 QRICH1Q2TAL8 776 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 TTC39CQ8N584 583 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 TMEM35BQ8NCS4 154 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 FAF2Q96CS3 445 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 TRPV6Q9H1D0 765 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 ERCC6L2Q5T890 1561 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 REREQ9P2R6 1566 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SPHKAPQ2M3C7 1700 aa11.98□□□□□ -0.49
LRRC55-201ENST00000497933 SYCE1LA8MT33 242 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 186.9 ms