RNA–Protein interactions for RNA: ENST00000497539.5

SNRNP200-208, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 1 (best)

Gene SNRNP200, Length 2,666 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-208ENST00000497539 DDNO94850 711 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 TUBBP07437 444 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PLEKP08567 350 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 IMPDH2P12268 514 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 IREB2P48200 963 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PPARDQ03181 441 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 CRYMQ14894 314 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PAPD7Q5XG87 772 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SND1Q7KZF4 910 aaKnown RBP eCLIP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 HS2ST1Q7LGA3 356 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 BCAS3Q9H6U6 928 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 VIPAS39Q9H9C1 493 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 C17orf75Q9HAS0 396 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 DMGDHQ9UI17 866 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PCDHA10Q9Y5I2 948 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 DDX39AO00148 427 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 ZNF263O14978 683 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PMM2O15305 246 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 MYCLP12524 364 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PAX3P23760 479 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 EDNRBP24530 442 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 ELF1P32519 619 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 COPB2P35606 906 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 KIF11P52732 1056 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 UGCGQ16739 394 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SFMBT2Q5VUG0 894 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 RRAGAQ7L523 313 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SULF1Q8IWU6 871 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 ARMC2Q8NEN0 867 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 GIMAP7Q8NHV1 300 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 CCDC42Q96M95 316 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 USP20Q9Y2K6 914 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 CSADQ9Y600 493 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 IGSF9BQ9UPX0 1349 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SPDYE5A6NIY4 337 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 TPD52L2O43399 206 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PPP1R12BO60237 982 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 TLR2O60603 784 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 IRAK1P51617 712 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 KCNA1Q09470 495 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 GNPTABQ3T906 1256 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 RPUSD2Q8IZ73 545 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 FAM76AQ8TAV0 307 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SPIRE2Q8WWL2 714 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 ACCSQ96QU6 501 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 LRRC1Q9BTT6 524 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 TRIM6Q9C030 488 aaPredicted RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SIX2Q9NPC8 291 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 PDLIM7Q9NR12 457 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SPATS2LQ9NUQ6 558 aaKnown RBP12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 SAMM50Q9Y512 469 aa12.55□□□□□ -0.4
SNRNP200-208ENST00000497539 UNCXA6NJT0 531 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 ATG7O95352 703 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 PON1P27169 355 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 EIF4A3P38919 411 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 PRKCIP41743 596 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 JAM2P57087 298 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 SPA17Q15506 151 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 SLC9C1Q4G0N8 1177 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 ZC2HC1CQ53FD0 456 aaPredicted RBP12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 KLHDC7AQ5VTJ3 777 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 CACNA2D4Q7Z3S7 1137 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 FAM186BQ8IYM0 893 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 CCDC155Q8N6L0 562 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 ATP6V0A1Q93050 837 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 SLC24A3Q9HC58 644 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 RNF181Q9P0P0 153 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 FZD1Q9UP38 647 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 BZW2Q9Y6E2 419 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 SFI1A8K8P3 1242 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 BACH1O14867 736 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 RTN2O75298 545 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 PSAPP07602 524 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 PPIL2Q13356 520 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 RBBP5Q15291 538 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 GBP6Q6ZN66 633 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 ERO1BQ86YB8 467 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 NTPCRQ9BSD7 190 aaKnown RBP12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 MLXIPQ9HAP2 919 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 NENFQ9UMX5 172 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 PCDHA13Q9Y5I0 950 aa12.54□□□□□ -0.4
SNRNP200-208ENST00000497539 SRCAPQ6ZRS2 3230 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 TESPA1A2RU30 521 aaPredicted RBP12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 P4HA2O15460 535 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 RFX1P22670 979 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 CASP4P49662 377 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 EXOC3L4Q17RC7 722 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 TREML2Q5T2D2 321 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 ABHD15Q6UXT9 468 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 OTUD6AQ7L8S5 288 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 RBM12BQ8IXT5 1001 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 ANKRD13CQ8N6S4 541 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 BCAS4Q8TDM0 211 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 JPH1Q9HDC5 661 aaPredicted RBP12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 ADM5C9JUS6 153 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 K7ENM7 598 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 GFPT2O94808 682 aa12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 SNUPNO95149 360 aaKnown RBP12.53□□□□□ -0.4
SNRNP200-208ENST00000497539 OATP04181 439 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms