RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 FZD1Q9UP38 647 aa5.12□□□□□ -1.59
CBX3-208ENST00000497498 LY86O95711 162 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 CFBP00751 764 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 PHC1P78364 1004 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 FAM214AQ32MH5 1076 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 ZBTB41Q5SVQ8 909 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 SMC1BQ8NDV3 1235 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 UBXN4Q92575 508 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 NINJ1Q92982 152 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 FDXACB1Q9BRP7 624 aaPredicted RBP5.11□□□□□ -1.59
CBX3-208ENST00000497498 PIF1Q9H611 641 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 THG1LQ9NWX6 298 aaKnown RBP5.11□□□□□ -1.59
CBX3-208ENST00000497498 MSRAQ9UJ68 235 aa5.11□□□□□ -1.59
CBX3-208ENST00000497498 TRIM24O15164 1050 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 ITGB1P05556 798 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 HK1P19367 917 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 GPR15P49685 360 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 KPNA1P52294 538 aaPredicted RBP5.1□□□□□ -1.59
CBX3-208ENST00000497498 WNT3AP56704 352 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 CCDC178Q5BJE1 867 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 C16orf86Q6ZW13 317 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 TAS1R1Q7RTX1 841 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 ZNF610Q8N9Z0 462 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 OR52N2Q8NGI0 321 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 ZG16BQ96DA0 208 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 DRC1Q96MC2 740 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 HS3ST4Q9Y661 456 aa5.1□□□□□ -1.59
CBX3-208ENST00000497498 ST20-MTHFSA0A0A6YYL1 179 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 A0A1W2PR48 441 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 DNAJC6O75061 913 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 PPFIA4O75335 1185 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 PROZP22891 400 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 CASRP41180 1078 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 MRPL49Q13405 166 aaKnown RBP5.09□□□□□ -1.59
CBX3-208ENST00000497498 PCBP1Q15365 356 aaKnown RBP eCLIP5.09□□□□□ -1.59
CBX3-208ENST00000497498 C21orf62-AS1Q17RA5 79 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 TKFCQ3LXA3 575 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 MBNL2Q5VZF2 373 aaKnown RBP5.09□□□□□ -1.59
CBX3-208ENST00000497498 LRRC55Q6ZSA7 311 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 CXorf67Q86X51 503 aaPredicted RBP5.09□□□□□ -1.59
CBX3-208ENST00000497498 DNAJC10Q8IXB1 793 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 OR5M3Q8NGP4 307 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 GAB3Q8WWW8 586 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 FERMT2Q96AC1 680 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 CPPED1Q9BRF8 314 aaPredicted RBP5.09□□□□□ -1.59
CBX3-208ENST00000497498 MLST8Q9BVC4 326 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 CPEB1Q9BZB8 566 aaKnown RBP5.09□□□□□ -1.59
CBX3-208ENST00000497498 TMPRSS11EQ9UL52 423 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.09□□□□□ -1.59
CBX3-208ENST00000497498 SORCS3Q9UPU3 1222 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 NUMBLQ9Y6R0 609 aa5.09□□□□□ -1.59
CBX3-208ENST00000497498 NRP2O60462 931 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 RECQL4O94761 1208 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 GCP02774 474 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 ZFP36P26651 326 aaKnown RBP5.08□□□□□ -1.6
CBX3-208ENST00000497498 OCRLQ01968 901 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 TERF2Q15554 542 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 VPS72Q15906 364 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 LY6G5CQ5SRR4 150 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 CNNM4Q6P4Q7 775 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 DOK3Q7L591 496 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 FAM83AQ86UY5 434 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 LYSMD2Q8IV50 215 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 VRK3Q8IV63 474 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 SYNE4Q8N205 404 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 PPM1KQ8N3J5 372 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 GLB1L3Q8NCI6 653 aaPredicted RBP5.08□□□□□ -1.6
CBX3-208ENST00000497498 CPT1CQ8TCG5 803 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 APPBP2Q92624 585 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 IL17RAQ96F46 866 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 LSM14BQ9BX40 385 aaKnown RBP5.08□□□□□ -1.6
CBX3-208ENST00000497498 WNT8AQ9H1J5 351 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 USP18Q9UMW8 372 aa5.08□□□□□ -1.6
CBX3-208ENST00000497498 PRSS38A1L453 326 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 AHRRA9YTQ3 701 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 SCAF4O95104 1147 aaKnown RBP5.07□□□□□ -1.6
CBX3-208ENST00000497498 ABHD16AO95870 558 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 LSP1P33241 339 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 ADRA1BP35368 520 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 GZMKP49863 264 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 SCNN1BP51168 640 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 FSTL1Q12841 308 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 SEPT7Q16181 437 aaKnown RBP5.07□□□□□ -1.6
CBX3-208ENST00000497498 IQSEC1Q6DN90 963 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 GPRIN1Q7Z2K8 1008 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 SLC41A1Q8IVJ1 513 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 NIM1KQ8IY84 436 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 MSL3Q8N5Y2 521 aaKnown RBP5.07□□□□□ -1.6
CBX3-208ENST00000497498 PROKR1Q8TCW9 393 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 RSAD2Q8WXG1 361 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 KCNH6Q9H252 994 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 SPTLC3Q9NUV7 552 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 FANCLQ9NW38 375 aa5.07□□□□□ -1.6
CBX3-208ENST00000497498 LCHNA4D1U4 455 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 GRID2IPA4D2P6 1211 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 PPFIA2O75334 1257 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 RHOBTB3O94955 611 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 GYPEP15421 78 aa5.06□□□□□ -1.6
CBX3-208ENST00000497498 XPAP23025 273 aaPredicted RBP5.06□□□□□ -1.6
CBX3-208ENST00000497498 LSSP48449 732 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms