RNA–Protein interactions for RNA: ENST00000497139.5

VEGFA-215, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 2,746 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-215ENST00000497139 PASKQ96RG2 1323 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 PCDH11YQ9BZA8 1340 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 MAGEB6P1A0A0J9YX57 407 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 H0Y3Z8 333 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 MAP3K7O43318 606 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 T-ENOLP0DO92 83 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 VCAM1P19320 739 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 ABCD1P33897 745 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 SLC18A1P54219 525 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 EDRF1Q3B7T1 1238 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 DPY19L2P1Q6NXN4 242 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 RASGRP4Q8TDF6 673 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 CDK5RAP3Q96JB5 506 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 CCDC85AQ96PX6 553 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-215ENST00000497139 ZNF184Q99676 751 aaPredicted RBP13.93□□□□□ -0.18
VEGFA-215ENST00000497139 NT5C3AQ9H0P0 336 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 DHX36Q9H2U1 1008 aaKnown RBP13.93□□□□□ -0.18
VEGFA-215ENST00000497139 ERVK-5Q9HDB9 667 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 G3BP2Q9UN86 482 aaKnown RBP13.93□□□□□ -0.18
VEGFA-215ENST00000497139 WNK3Q9BYP7 1800 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 ENTPD5O75356 428 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 TMCC1O94876 653 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 KRT13P13646 458 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 FXR2P51116 673 aaKnown RBP eCLIP13.93□□□□□ -0.18
VEGFA-215ENST00000497139 CYP1B1Q16678 543 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 SLC45A4Q5BKX6 768 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 GDAP1Q8TB36 358 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 BARHL2Q9NY43 387 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 ZNF510Q9Y2H8 683 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 TBC1D30Q9Y2I9 924 aa13.93□□□□□ -0.18
VEGFA-215ENST00000497139 ZWINTO95229 277 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 VEGFAP15692 232 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-215ENST00000497139 LMNB1P20700 586 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 HADHBP55084 474 aaKnown RBP13.92□□□□□ -0.18
VEGFA-215ENST00000497139 CDR2Q01850 454 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 PRPF4BQ13523 1007 aaKnown RBP13.92□□□□□ -0.18
VEGFA-215ENST00000497139 NONOQ15233 471 aaKnown RBP eCLIP13.92□□□□□ -0.185e-6■□□□□ 9.8
VEGFA-215ENST00000497139 LONRF1Q17RB8 773 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 CADPS2Q86UW7 1296 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 SYCP3Q8IZU3 236 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 ANKRD35Q8N283 1001 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 RIBC1Q8N443 379 aaPredicted RBP13.92□□□□□ -0.18
VEGFA-215ENST00000497139 RAB34Q9BZG1 259 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 LAMB1P07942 1786 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 JAM2P57087 298 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 KCNH2Q12809 1159 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 NR1H3Q13133 447 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 CALCOCO2Q13137 446 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 MAP7Q14244 749 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 LIN52Q52LA3 116 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 MIGA1Q8NAN2 632 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 IRGQQ8WZA9 623 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 SYNCQ9H7C4 482 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 UBN1Q9NPG3 1134 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 WHRNQ9P202 907 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 MUTP22033 750 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 CYP7A1P22680 504 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 GALCP54803 685 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 RCN1Q15293 331 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 FRMD5Q7Z6J6 570 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 NEK8Q86SG6 692 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 UBL4BQ8N7F7 174 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 DDX12PQ92771 950 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 DDX17Q92841 729 aaKnown RBP13.92□□□□□ -0.18
VEGFA-215ENST00000497139 GPKOWQ92917 476 aaPredicted RBP eCLIP13.92□□□□□ -0.181e-32■■□□□ 11.4
VEGFA-215ENST00000497139 CDC42EP4Q9H3Q1 356 aaKnown RBP13.92□□□□□ -0.18
VEGFA-215ENST00000497139 PREBQ9HCU5 417 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 LRP2BPQ9P2M1 347 aa13.92□□□□□ -0.18
VEGFA-215ENST00000497139 STRCQ7RTU9 1775 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 DDX3XO00571 662 aaKnown RBP eCLIP13.91□□□□□ -0.181e-8■□□□□ 11.2
VEGFA-215ENST00000497139 CCNT1O60563 726 aaKnown RBP13.91□□□□□ -0.18
VEGFA-215ENST00000497139 CCDC22O60826 627 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 LYNP07948 512 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 FAM200BP0CF97 657 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 TECP42680 631 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 CDK7P50613 346 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 COASYQ13057 564 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 PTPROQ16827 1216 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 TMEM266Q2M3C6 531 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 KHDC1Q4VXA5 237 aaKnown RBP13.91□□□□□ -0.18
VEGFA-215ENST00000497139 FAM26FQ5R3K3 315 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 OTUD6AQ7L8S5 288 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 DYMQ7RTS9 669 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 NME8Q8N427 588 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 SLC35G2Q8TBE7 412 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 SDR42E1Q8WUS8 393 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 C18orf8Q96DM3 657 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 PNMA5Q96PV4 448 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 NDUFA13Q9P0J0 144 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 PPP1R9AQ9ULJ8 1098 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 UMODL1Q5DID0 1318 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 A8MXQ7 604 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 CDH16O75309 829 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 GH1P01241 217 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 MPP2Q14168 576 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 TMEM119Q4V9L6 283 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 CCDC137Q6PK04 289 aaKnown RBP13.91□□□□□ -0.18
VEGFA-215ENST00000497139 KIF6Q6ZMV9 814 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 CCNJLQ8IV13 435 aa13.91□□□□□ -0.18
VEGFA-215ENST00000497139 PRELID2Q8N945 189 aa13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms