RNA–Protein interactions for RNA: ENST00000497069.2

PMF1-205, Transcript of polyamine modulated factor 1, humanhuman

TSL 3

Gene PMF1, Length 837 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-205ENST00000497069 DPYDQ12882 1025 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 PNOCQ13519 176 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 ALCAMQ13740 583 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 FAM187BQ17R55 369 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 FAM26FQ5R3K3 315 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 PRPF38BQ5VTL8 546 aaKnown RBP17.42■□□□□ 0.38
PMF1-205ENST00000497069 TWF2Q6IBS0 349 aaKnown RBP17.42■□□□□ 0.38
PMF1-205ENST00000497069 ELOA2Q8IYF1 753 aaPredicted RBP17.42■□□□□ 0.38
PMF1-205ENST00000497069 HERVK_113Q902F9 699 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 RNPC3Q96LT9 517 aaKnown RBP17.42■□□□□ 0.38
PMF1-205ENST00000497069 ADAM2Q99965 735 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 MRPL4Q9BYD3 311 aaKnown RBP17.42■□□□□ 0.38
PMF1-205ENST00000497069 TMX1Q9H3N1 280 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 ST6GALNAC4Q9H4F1 302 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 AGPAT5Q9NUQ2 364 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 SIP14410 1827 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 PDE4DIPQ5VU43 2346 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 SCN5AQ14524 2016 aa17.42■□□□□ 0.38
PMF1-205ENST00000497069 AMHP03971 560 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 PSMD2Q13200 908 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 AMHR2Q16671 573 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 TCTN1Q2MV58 587 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 KMT5BQ4FZB7 885 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 NOTUMQ6P988 496 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 ZNF720Q7Z2F6 126 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 SMARCE1Q969G3 411 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 HVCN1Q96D96 273 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 BICD1Q96G01 975 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 CPB2Q96IY4 423 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 C1orf112Q9NSG2 853 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 RNF216Q9NWF9 866 aaPredicted RBP17.41■□□□□ 0.38
PMF1-205ENST00000497069 RMND1Q9NWS8 449 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 TBX20Q9UMR3 447 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 SLC4A7Q9Y6M7 1214 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 CNTNAP2Q9UHC6 1331 aa17.41■□□□□ 0.38
PMF1-205ENST00000497069 ENPP3O14638 875 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 N4BP3O15049 544 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 B4GALT5O43286 388 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 KLRC4O43908 158 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 ARF4P18085 180 aaPredicted RBP17.4■□□□□ 0.38
PMF1-205ENST00000497069 IBSPP21815 317 aaPredicted RBP17.4■□□□□ 0.38
PMF1-205ENST00000497069 WDR5P61964 334 aaKnown RBP17.4■□□□□ 0.38
PMF1-205ENST00000497069 GTF2BQ00403 316 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 SHHQ15465 462 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 ZC2HC1CQ53FD0 456 aaPredicted RBP17.4■□□□□ 0.38
PMF1-205ENST00000497069 C9orf50Q5SZB4 431 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 ATF7IP2Q5U623 682 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 APBB1IPQ7Z5R6 666 aaPredicted RBP17.4■□□□□ 0.38
PMF1-205ENST00000497069 HPS3Q969F9 1004 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 CCDC51Q96ER9 411 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 FIZ1Q96SL8 496 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 TSPYL2Q9H2G4 693 aaPredicted RBP17.4■□□□□ 0.38
PMF1-205ENST00000497069 RGS18Q9NS28 235 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 EXOC7Q9UPT5 735 aa17.4■□□□□ 0.38
PMF1-205ENST00000497069 RBAK-RBAKDNI3L0D1 243 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 MGEA5O60502 916 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 SKIP12755 728 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 DSC3Q14574 896 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 KCNB1Q14721 858 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 CAMK4Q16566 473 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 SLC24A5Q71RS6 500 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 TAS1R3Q7RTX0 852 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 MAP4K3Q8IVH8 894 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 TDHQ8IZJ6 230 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 MYOCDQ8IZQ8 938 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 KCNN1Q92952 543 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 GSDMAQ96QA5 445 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 ACCSQ96QU6 501 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 ADPGKQ9BRR6 497 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 TRIM6Q9C030 488 aaPredicted RBP17.39■□□□□ 0.37
PMF1-205ENST00000497069 NUP62CLQ9H1M0 184 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 CLSTN2Q9H4D0 955 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 SLC39A2Q9NP94 309 aa17.39■□□□□ 0.37
PMF1-205ENST00000497069 A0A1B0GUA9 196 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 HNRNPDLO14979 420 aaKnown RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 RHOBTB3O94955 611 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 MYBP10242 640 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 HOXA11P31270 313 aaPredicted RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.371e-6■■■□□ 15
PMF1-205ENST00000497069 SARSP49591 514 aaKnown RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 LIG4P49917 911 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 RAB27AP51159 221 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 EHHADHQ08426 723 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 L1TD1Q5T7N2 865 aaKnown RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 NT5DC1Q5TFE4 455 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 SLC27A1Q6PCB7 646 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 ZPBP2Q6X784 338 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 LIN28BQ6ZN17 250 aaKnown RBP eCLIP17.38■□□□□ 0.37
PMF1-205ENST00000497069 RTN4RL1Q86UN2 441 aaPredicted RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 SYCP3Q8IZU3 236 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 GPT2Q8TD30 523 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 LINC01599Q8WXQ3 324 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 SLC9A7Q96T83 725 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 ACO2Q99798 780 aaKnown RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 TCHPQ9BT92 498 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 TARS2Q9BW92 718 aaKnown RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 TMEM206Q9H813 350 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 CXXC1Q9P0U4 656 aaPredicted RBP17.38■□□□□ 0.37
PMF1-205ENST00000497069 LRFN2Q9ULH4 789 aa17.38■□□□□ 0.37
PMF1-205ENST00000497069 USP20Q9Y2K6 914 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms