RNA–Protein interactions for RNA: ENST00000496852.5

ATPAF2-208, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

TSL 2

Gene ATPAF2, Length 1,662 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-208ENST00000496852 CCDC85CA6NKD9 419 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 PRKCBP05771 671 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 CLTBP09497 229 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 STIM1Q13586 685 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 AMHR2Q16671 573 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 KNOP1Q1ED39 458 aaKnown RBP15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 CT47A1Q5JQC4 288 aaPredicted RBP15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 PPP4R3CPQ6ZMV5 832 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 NELFCDQ8IXH7 590 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 DHTKD1Q96HY7 919 aaPredicted RBP15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 TMEM206Q9H813 350 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 PRMT7Q9NVM4 692 aaPredicted RBP15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 DACH1Q9UI36 760 aa15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 PDCD11Q14690 1871 aaKnown RBP15.33■□□□□ 0.04
ATPAF2-208ENST00000496852 UMODL1Q5DID0 1318 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 ACKR2O00590 384 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 PSMA7O14818 248 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 PIGRP01833 764 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 SELPP16109 830 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 STRN3Q13033 797 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 FBXO47Q5MNV8 452 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 CENPPQ6IPU0 288 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 LRRC8DQ7L1W4 858 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 PRIMPOLQ96LW4 560 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 OSBPL7Q9BZF2 842 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 IKZF4Q9H2S9 585 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 SEMA6BQ9H3T3 888 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 HIPK3Q9H422 1215 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 NOC2LQ9Y3T9 749 aaKnown RBP15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 SQORQ9Y6N5 450 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 RALGAPA2Q2PPJ7 1873 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 TTLL13PA6NNM8 815 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 TGFB1I1O43294 461 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 CCNE1P24864 410 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 ERCC5P28715 1186 aaPredicted RBP15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 PMS1P54277 932 aaKnown RBP15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 MBTPS1Q14703 1052 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 PCBP1Q15365 356 aaKnown RBP eCLIP15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 ZCWPW2Q504Y3 356 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 KLHL10Q6JEL2 608 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 FAM228AQ86W67 206 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 P2RX5Q93086 422 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 MED15Q96RN5 788 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 TMEM39AQ9NV64 488 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 EXOC7Q9UPT5 735 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 CTNND2Q9UQB3 1225 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 USP20Q9Y2K6 914 aa15.32■□□□□ 0.04
ATPAF2-208ENST00000496852 CNTNAP2Q9UHC6 1331 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 PDXKO00764 312 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 B4GALT5O43286 388 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 TSPAN1O60635 241 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 FGFR4P22455 802 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 SFPQP23246 707 aaKnown RBP eCLIP15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 PAK1Q13153 545 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 LPIN1Q14693 890 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 SLC39A4Q6P5W5 647 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 ZPBP2Q6X784 338 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 SYCP3Q8IZU3 236 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 NELFBQ8WX92 580 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 MRPL4Q9BYD3 311 aaKnown RBP15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 NAT10Q9H0A0 1025 aaKnown RBP15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 GBP3Q9H0R5 595 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 WNT8AQ9H1J5 351 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 TYW1Q9NV66 732 aaKnown RBP15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 RWDD2AQ9UIY3 292 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 TRAF3IP3Q9Y228 551 aa15.31■□□□□ 0.04
ATPAF2-208ENST00000496852 TRIM49BA6NDI0 452 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 TISP43B9A030 160 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 ANKRD63C9JTQ0 380 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 RBAK-RBAKDNI3L0D1 243 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 KIAA0355O15063 1070 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 RPS6KA5O75582 802 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 ERLIN2O94905 339 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 PRPF4BQ13523 1007 aaKnown RBP15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 GPNMBQ14956 572 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 FOXR2Q6PJQ5 311 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 CATSPER4Q7RTX7 472 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 USP38Q8NB14 1042 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 ACO2Q99798 780 aaKnown RBP15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 TARS2Q9BW92 718 aaKnown RBP15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 PPP1R12CQ9BZL4 782 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 RBSNQ9H1K0 784 aa15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 AGO3Q9H9G7 860 aaKnown RBP15.3■□□□□ 0.04
ATPAF2-208ENST00000496852 TRIM43BA6NCK2 446 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 HNRNPDLO14979 420 aaKnown RBP15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 GHRP10912 638 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 ARF4P18085 180 aaPredicted RBP15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 ZNF165P49910 485 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 STX17P56962 302 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 ANKRD40Q6AI12 368 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 TTI2Q6NXR4 508 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 TSHZ1Q6ZSZ6 1077 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 TRIM43Q96BQ3 446 aaPredicted RBP15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 BPIFA3Q9BQP9 254 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 ERVK-5Q9HDB9 667 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 AGPAT5Q9NUQ2 364 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 STYXL1Q9Y6J8 313 aa15.29■□□□□ 0.04
ATPAF2-208ENST00000496852 BICDL2A1A5D9 508 aa15.28■□□□□ 0.04
ATPAF2-208ENST00000496852 BECN2A8MW95 431 aa15.28■□□□□ 0.04
ATPAF2-208ENST00000496852 ABLIM1O14639 778 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms