RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 HOXA2O43364 376 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 B4GALT3O60512 393 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 NPTXRO95502 500 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 EOMESO95936 686 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 PLCG1P19174 1290 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 IRS1P35568 1242 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 NAMPTP43490 491 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 RAB27AP51159 221 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 SLC12A3P55017 1021 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 DHX8Q14562 1220 aaKnown RBP19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 NOTUMQ6P988 496 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 ZBTB8OSQ8IWT0 167 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 DEPTORQ8TB45 409 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 SPPL3Q8TCT6 385 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 EPSTI1Q96J88 318 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 CCDC113Q9H0I3 377 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 RNF39Q9H2S5 420 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 RNF216Q9NWF9 866 aaPredicted RBP19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 LMCD1Q9NZU5 365 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 THEGQ9P2T0 379 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 IPPQ9Y573 584 aa19.42■□□□□ 0.7
RHBDD3-207ENST00000496342 ZNF623O75123 536 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 OFD1O75665 1012 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 PRKCBP05771 671 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 PLA2G4BP0C869 781 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 LONP1P36776 959 aaKnown RBP19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 UBA7P41226 1012 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 PEX3P56589 373 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 TCEAL5Q5H9L2 206 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 P2RX5Q93086 422 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 AK8Q96MA6 479 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 PLVAPQ9BX97 442 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 NT5C3AQ9H0P0 336 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 NXF3Q9H4D5 531 aaKnown RBP19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 ZSCAN16Q9H4T2 348 aaPredicted RBP19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 BLOC1S4Q9NUP1 217 aa19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 TFIP11Q9UBB9 837 aaKnown RBP19.41■□□□□ 0.7
RHBDD3-207ENST00000496342 NT5C1B-RDH14C9J2C7 533 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 LAG3P18627 525 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 AXLP30530 894 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 MCM6Q14566 821 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 PTPROQ16827 1216 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 EEF1DP3Q658K8 133 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 PPP4R3CPQ6ZMV5 832 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 MRPL10Q7Z7H8 261 aaKnown RBP19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 ADGRD2Q7Z7M1 963 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 THNSL1Q8IYQ7 743 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 SYT2Q8N9I0 419 aaPredicted RBP19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 RASSF8Q8NHQ8 419 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 POF1BQ8WVV4 589 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 SYMPKQ92797 1274 aaKnown RBP19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 KIFAP3Q92845 792 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 CALML4Q96GE6 196 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 IFT74Q96LB3 600 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 GBP3Q9H0R5 595 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 FZD8Q9H461 694 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 RSAD1Q9HA92 442 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 TBC1D13Q9NVG8 400 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 PRMT7Q9NVM4 692 aaPredicted RBP19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 CNTNAP2Q9UHC6 1331 aa19.4■□□□□ 0.7
RHBDD3-207ENST00000496342 CCDC169A6NNP5 214 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 FGF18O76093 207 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 F13A1P00488 732 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 ZSCAN22P10073 491 aaPredicted RBP19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 SKIP12755 728 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 NCLP19338 710 aaKnown RBP19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 GTF2F1P35269 517 aaKnown RBP eCLIP19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 NPTX2P47972 431 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 PPP2R5AQ15172 486 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 TIGD5Q53EQ6 642 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 KCNT2Q6UVM3 1135 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 GLB1LQ6UWU2 654 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 TMEM173Q86WV6 379 aaPredicted RBP19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 C2orf40Q9H1Z8 148 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 PDZD7Q9H5P4 517 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 DNAJB4Q9UDY4 337 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 PCDHB12Q9Y5F1 795 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 SRPRBQ9Y5M8 271 aaKnown RBP19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 CITO14578 2027 aa19.39■□□□□ 0.69
RHBDD3-207ENST00000496342 ZC3H11AO75152 810 aaKnown RBP eCLIP19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 POMCP01189 267 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 ITGA4P13612 1032 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 AKAP5P24588 427 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 MLH1P40692 756 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 NASPP49321 788 aaPredicted RBP19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 PRPF4BQ13523 1007 aaKnown RBP19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 PDCD11Q14690 1871 aaKnown RBP19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 SLC39A14Q15043 492 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 PCBP1Q15365 356 aaKnown RBP eCLIP19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 MAPK6Q16659 721 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 FAM187BQ17R55 369 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 TMEM132AQ24JP5 1023 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 ARSHQ5FYA8 562 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 NOMO2Q5JPE7 1267 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 TAS1R3Q7RTX0 852 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 GPBP1Q86WP2 473 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 ZNF280BQ86YH2 543 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 UNC80Q8N2C7 3258 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 RAD54LQ92698 747 aa19.38■□□□□ 0.69
RHBDD3-207ENST00000496342 PGBD4Q96DM1 585 aa19.38■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms