RNA–Protein interactions for RNA: ENST00000496215.5

COL9A2-211, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 5

Gene COL9A2, Length 668 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-211ENST00000496215 SF3A1Q15459 793 aaKnown RBP22.83■■□□□ 1.25
COL9A2-211ENST00000496215 HYIQ5T013 277 aa22.83■■□□□ 1.25
COL9A2-211ENST00000496215 UBXN11Q5T124 520 aa22.83■■□□□ 1.25
COL9A2-211ENST00000496215 BSNDQ8WZ55 320 aa22.83■■□□□ 1.25
COL9A2-211ENST00000496215 ZNF558Q96NG5 402 aa22.83■■□□□ 1.25
COL9A2-211ENST00000496215 NECAB3Q96P71 396 aaPredicted RBP22.83■■□□□ 1.25
COL9A2-211ENST00000496215 PRMT7Q9NVM4 692 aaPredicted RBP22.83■■□□□ 1.25
COL9A2-211ENST00000496215 INPP5FQ9Y2H2 1132 aa22.83■■□□□ 1.25
COL9A2-211ENST00000496215 PCDHGC5Q9Y5F6 944 aa22.83■■□□□ 1.25
COL9A2-211ENST00000496215 B4GALT5O43286 388 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 FGF18O76093 207 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 ARF4P18085 180 aaPredicted RBP22.82■■□□□ 1.24
COL9A2-211ENST00000496215 GTF2F1P35269 517 aaKnown RBP eCLIP22.82■■□□□ 1.24
COL9A2-211ENST00000496215 UBE3AQ05086 875 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 KCTD17Q8N5Z5 321 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 CNNM3Q8NE01 707 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 DEPTORQ8TB45 409 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 POF1BQ8WVV4 589 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 IFT74Q96LB3 600 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 PRIMPOLQ96LW4 560 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 NCOR1O75376 2440 aa22.82■■□□□ 1.24
COL9A2-211ENST00000496215 STX6O43752 255 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 HSP90AA1P07900 732 aaKnown RBP22.81■■□□□ 1.24
COL9A2-211ENST00000496215 PBX3P40426 434 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 HYAL1Q12794 435 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 NOMO2Q5JPE7 1267 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 KCNT2Q6UVM3 1135 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 PPP4R3CPQ6ZMV5 832 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 KCNK18Q7Z418 384 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 MRPL10Q7Z7H8 261 aaKnown RBP22.81■■□□□ 1.24
COL9A2-211ENST00000496215 CABP7Q86V35 215 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 URGCPQ8TCY9 931 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 SYMPKQ92797 1274 aaKnown RBP22.81■■□□□ 1.24
COL9A2-211ENST00000496215 PPP2R3CQ969Q6 453 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 PNMA5Q96PV4 448 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 EIF2AQ9BY44 585 aaKnown RBP22.81■■□□□ 1.24
COL9A2-211ENST00000496215 TRIM6Q9C030 488 aaPredicted RBP22.81■■□□□ 1.24
COL9A2-211ENST00000496215 CSRNP2Q9H175 543 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 RSAD1Q9HA92 442 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 MTMR6Q9Y217 621 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 C5orf42Q9H799 3197 aa22.81■■□□□ 1.24
COL9A2-211ENST00000496215 SLC26A4O43511 780 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 NCLP19338 710 aaKnown RBP22.8■■□□□ 1.24
COL9A2-211ENST00000496215 LONP1P36776 959 aaKnown RBP22.8■■□□□ 1.24
COL9A2-211ENST00000496215 RNASELQ05823 741 aaKnown RBP22.8■■□□□ 1.24
COL9A2-211ENST00000496215 SLC27A1Q6PCB7 646 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 AGMOQ6ZNB7 445 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 ADGRD2Q7Z7M1 963 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 DRC1Q96MC2 740 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 RUSC1Q9BVN2 902 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 TLR9Q9NR96 1032 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 TBC1D13Q9NVG8 400 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 IPPQ9Y573 584 aa22.8■■□□□ 1.24
COL9A2-211ENST00000496215 ZC3H11AO75152 810 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL9A2-211ENST00000496215 OFD1O75665 1012 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 SSBP05455 408 aaKnown RBP eCLIP22.79■■□□□ 1.24
COL9A2-211ENST00000496215 PRKCBP05771 671 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 ITGA4P13612 1032 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 KCNA5P22460 613 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 LTBRP36941 435 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 UBA7P41226 1012 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 MAPK6Q16659 721 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 FAM187BQ17R55 369 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 TMEM132AQ24JP5 1023 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 TMEM119Q4V9L6 283 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 HACE1Q8IYU2 909 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 SMG8Q8ND04 991 aaKnown RBP22.79■■□□□ 1.24
COL9A2-211ENST00000496215 RASSF8Q8NHQ8 419 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 CALML4Q96GE6 196 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 PLIN2Q99541 437 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 UBN1Q9NPG3 1134 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 LZTS1Q9Y250 596 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 CLIC4Q9Y696 253 aa22.79■■□□□ 1.24
COL9A2-211ENST00000496215 CARNS1A5YM72 827 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 LINC01565O15544 149 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 HIP1RO75146 1068 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 LIG1P18858 919 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 EFNA5P52803 228 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 PLCB3Q01970 1234 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 PRPF4BQ13523 1007 aaKnown RBP22.78■■□□□ 1.24
COL9A2-211ENST00000496215 CTC1Q2NKJ3 1217 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 RINT1Q6NUQ1 792 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.78■■□□□ 1.24
COL9A2-211ENST00000496215 PABPC5Q96DU9 382 aaKnown RBP22.78■■□□□ 1.24
COL9A2-211ENST00000496215 UHRF1Q96T88 793 aaPredicted RBP22.78■■□□□ 1.24
COL9A2-211ENST00000496215 KIFC3Q9BVG8 833 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 TIPINQ9BVW5 301 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 CCDC113Q9H0I3 377 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 FZD8Q9H461 694 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 ZSCAN16Q9H4T2 348 aaPredicted RBP22.78■■□□□ 1.24
COL9A2-211ENST00000496215 POLD4Q9HCU8 107 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 SPG21Q9NZD8 308 aa22.78■■□□□ 1.24
COL9A2-211ENST00000496215 H3BQ06 376 aaPredicted RBP22.77■■□□□ 1.24
COL9A2-211ENST00000496215 B4GALT3O60512 393 aa22.77■■□□□ 1.24
COL9A2-211ENST00000496215 NPTXRO95502 500 aa22.77■■□□□ 1.24
COL9A2-211ENST00000496215 ALDH7A1P49419 539 aaKnown RBP22.77■■□□□ 1.24
COL9A2-211ENST00000496215 BCAR1P56945 870 aa22.77■■□□□ 1.24
COL9A2-211ENST00000496215 ERVFC1P60507 584 aa22.77■■□□□ 1.24
COL9A2-211ENST00000496215 KRT17Q04695 432 aa22.77■■□□□ 1.24
COL9A2-211ENST00000496215 GRIN1Q05586 938 aa22.77■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms