RNA–Protein interactions for RNA: ENST00000496104.1

XPA-204, Transcript of XPA, DNA damage recognition and repair factor, humanhuman

TSL 3

Gene XPA, Length 429 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPA-204ENST00000496104 NR2E1Q9Y466 385 aa5.53□□□□□ -1.52
XPA-204ENST00000496104 TTC3P53804 2025 aa5.53□□□□□ -1.52
XPA-204ENST00000496104 C2orf16Q68DN1 1984 aa5.53□□□□□ -1.52
XPA-204ENST00000496104 DOCK8Q8NF50 2099 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 GREB1LQ9C091 1923 aaPredicted RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 ACACAQ13085 2346 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 RALGAPA1Q6GYQ0 2036 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 PYCARD-AS1I3L0S3 204 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 WDR46O15213 610 aaKnown RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 CDC45O75419 566 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 TECP42680 631 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 TXKP42681 527 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 PLCD1P51178 756 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 TDGQ13569 410 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 UBAP2LQ14157 1087 aaKnown RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 HLTFQ14527 1009 aaKnown RBP eCLIP5.52□□□□□ -1.53
XPA-204ENST00000496104 CSRP2Q16527 193 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 ATP2B3Q16720 1220 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 WDR44Q5JSH3 913 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 SNRNP48Q6IEG0 339 aaKnown RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 PSAPL1Q6NUJ1 521 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 EEPD1Q7L9B9 569 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 FERMT3Q86UX7 667 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 ZNF513Q8N8E2 541 aaPredicted RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 TDRD5Q8NAT2 981 aaKnown RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 PJA1Q8NG27 643 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 COPS5Q92905 334 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 TRIM11Q96F44 468 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 DDX11Q96FC9 970 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 PLVAPQ9BX97 442 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 TEX13BQ9BXU2 312 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 EHD4Q9H223 541 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 VCPKMTQ9H867 229 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 FBXO4Q9UKT5 387 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 PNMA2Q9UL42 364 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 CA14Q9ULX7 337 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 TMX2Q9Y320 296 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 COL5A1P20908 1838 aaPredicted RBP5.52□□□□□ -1.53
XPA-204ENST00000496104 LOXHD1Q8IVV2 1947 aa5.52□□□□□ -1.53
XPA-204ENST00000496104 CACNA1EQ15878 2313 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 PTPRQQ9UMZ3 2332 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 SPATA31C2B4DYI2 1134 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 EYA2O00167 538 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 ATP2A1O14983 1001 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 PAX4O43316 350 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 TBC1D4O60343 1298 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 CAND2O75155 1236 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 MICAL2O94851 1124 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 MMP3P08254 477 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 ATF4P18848 351 aaPredicted RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 GRNP28799 593 aaKnown RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 CHMP4BP1P59074 171 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 DYNLL1P63167 89 aaKnown RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 TROAPQ12815 778 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 SERINC3Q13530 473 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 SF3A2Q15428 464 aaKnown RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 CERKLQ49MI3 558 aaPredicted RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 ZNF394Q53GI3 561 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 CHSY3Q70JA7 882 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 ZNF843Q8N446 348 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 RASGRP4Q8TDF6 673 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 STAG1Q8WVM7 1258 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 RSAD2Q8WXG1 361 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 LINC01599Q8WXQ3 324 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 DDX1Q92499 740 aaKnown RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 EVI5LQ96CN4 794 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 IL17RAQ96F46 866 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 SRPK1Q96SB4 655 aaKnown RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 MTA3Q9BTC8 594 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 ADAM7Q9H2U9 754 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 TLE6Q9H808 572 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 KCNK12Q9HB15 430 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 GPAMQ9HCL2 828 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 PRMT8Q9NR22 394 aaPredicted RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 ZSCAN32Q9NX65 697 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 HMG20BQ9P0W2 317 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 WNT16Q9UBV4 365 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 MTF2Q9Y483 593 aaPredicted RBP5.51□□□□□ -1.53
XPA-204ENST00000496104 DOPEY2Q9Y3R5 2298 aa5.51□□□□□ -1.53
XPA-204ENST00000496104 ZFHX3Q15911 3703 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 MGAQ8IWI9 3026 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 SHISA7A6NL88 538 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 HIDE1A8MVS5 230 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 LRP3O75074 770 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 EOMESO95936 686 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 RETP07949 1114 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 COPB2P35606 906 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 CTBSQ01459 385 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 CSTF1Q05048 431 aaKnown RBP5.5□□□□□ -1.53
XPA-204ENST00000496104 ZNF252P-AS1Q0IIN9 211 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 C19orf57Q0VDD7 668 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 LARP7Q4G0J3 582 aaKnown RBP eCLIP5.5□□□□□ -1.53
XPA-204ENST00000496104 FAM83BQ5T0W9 1011 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 IQSEC1Q6DN90 963 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 LLGL2Q6P1M3 1020 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 C11orf96Q7Z7L8 435 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 AMOTL1Q8IY63 956 aa5.5□□□□□ -1.53
XPA-204ENST00000496104 NUP88Q99567 741 aaPredicted RBP5.5□□□□□ -1.53
XPA-204ENST00000496104 NIFKQ9BYG3 293 aaKnown RBP5.5□□□□□ -1.53
XPA-204ENST00000496104 TRIM55Q9BYV6 548 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms