RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 SQORQ9Y6N5 450 aa21.4■■□□□ 1.02
ATG3-208ENST00000495756 TANC1Q9C0D5 1861 aa21.4■■□□□ 1.02
ATG3-208ENST00000495756 ACKR2O00590 384 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 GHRP10912 638 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 FGFR4P22455 802 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 SFPQP23246 707 aaKnown RBP eCLIP21.39■■□□□ 1.02
ATG3-208ENST00000495756 CYP2C18P33260 490 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 STIM1Q13586 685 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 LPIN1Q14693 890 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 AMHR2Q16671 573 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 PPP4R3CPQ6ZMV5 832 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 NELFCDQ8IXH7 590 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 USP38Q8NB14 1042 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 PRIMPOLQ96LW4 560 aa21.39■■□□□ 1.02
ATG3-208ENST00000495756 RPS6KA5O75582 802 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 ERLIN2O94905 339 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 EDN1P05305 212 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 PPP1R2P41236 205 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 CATSPER4Q7RTX7 472 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 FAM228AQ86W67 206 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 TMEM206Q9H813 350 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 AGO3Q9H9G7 860 aaKnown RBP21.39■■□□□ 1.01
ATG3-208ENST00000495756 EXOC7Q9UPT5 735 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 USP20Q9Y2K6 914 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 ZMYM2Q9UBW7 1377 aa21.39■■□□□ 1.01
ATG3-208ENST00000495756 PSMA7O14818 248 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 B4GALT5O43286 388 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 TSPAN1O60635 241 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 TIMP1P01033 207 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 CCL23P55773 120 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 PRPF4BQ13523 1007 aaKnown RBP21.38■■□□□ 1.01
ATG3-208ENST00000495756 KNOP1Q1ED39 458 aaKnown RBP21.38■■□□□ 1.01
ATG3-208ENST00000495756 TSHZ1Q6ZSZ6 1077 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 C7orf61Q8IZ16 206 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 SYCP3Q8IZU3 236 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 MRPL4Q9BYD3 311 aaKnown RBP21.38■■□□□ 1.01
ATG3-208ENST00000495756 IKZF4Q9H2S9 585 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 DACH1Q9UI36 760 aa21.38■■□□□ 1.01
ATG3-208ENST00000495756 CNTNAP2Q9UHC6 1331 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 TTLL13PA6NNM8 815 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 HNRNPDLO14979 420 aaKnown RBP21.37■■□□□ 1.01
ATG3-208ENST00000495756 PARNO95453 639 aaKnown RBP21.37■■□□□ 1.01
ATG3-208ENST00000495756 PIGRP01833 764 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 RAG1P15918 1043 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 ITGB8P26012 769 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 GPNMBQ14956 572 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 KLHL10Q6JEL2 608 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 BICD1Q96G01 975 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 DHTKD1Q96HY7 919 aaPredicted RBP21.37■■□□□ 1.01
ATG3-208ENST00000495756 SCLYQ96I15 445 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 TARS2Q9BW92 718 aaKnown RBP21.37■■□□□ 1.01
ATG3-208ENST00000495756 KCTD10Q9H3F6 313 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 ST3GAL5Q9UNP4 418 aa21.37■■□□□ 1.01
ATG3-208ENST00000495756 RBAK-RBAKDNI3L0D1 243 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 GPR182O15218 404 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 EVI5O60447 810 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 NBNO60934 754 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 CD52P31358 61 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 PAK2Q13177 524 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 ZPBP2Q6X784 338 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 GBP3Q9H0R5 595 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 ERVK-5Q9HDB9 667 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 AGPAT5Q9NUQ2 364 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 PRKAG2Q9UGJ0 569 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 PADI3Q9ULW8 664 aa21.36■■□□□ 1.01
ATG3-208ENST00000495756 TGFB1I1O43294 461 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 ARF4P18085 180 aaPredicted RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 HOXA11P31270 313 aaPredicted RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 LIG4P49917 911 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 ZNF445P59923 1031 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 NCBP1Q09161 790 aaKnown RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 NFX1Q12986 1120 aaKnown RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 ANO6Q4KMQ2 910 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 CENPPQ6IPU0 288 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 C11orf57Q6ZUT1 292 aaPredicted RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 ACO2Q99798 780 aaKnown RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 DNAJC25Q9H1X3 360 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 SEMA6BQ9H3T3 888 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 TYW1Q9NV66 732 aaKnown RBP21.35■■□□□ 1.01
ATG3-208ENST00000495756 CTNND2Q9UQB3 1225 aa21.35■■□□□ 1.01
ATG3-208ENST00000495756 TISP43B9A030 160 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 PDXKO00764 312 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 CCNE1P24864 410 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 RFC2P35250 354 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 PAK1Q13153 545 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 CT47A1Q5JQC4 288 aaPredicted RBP21.34■■□□□ 1.01
ATG3-208ENST00000495756 ATF7IP2Q5U623 682 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 MFSD5Q6N075 450 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 SLC39A4Q6P5W5 647 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 LRSAM1Q6UWE0 723 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 HS2ST1Q7LGA3 356 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 NELFBQ8WX92 580 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 P2RX5Q93086 422 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 CPB2Q96IY4 423 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 ANP32EQ9BTT0 268 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 IFIH1Q9BYX4 1025 aaKnown RBP21.34■■□□□ 1.01
ATG3-208ENST00000495756 SCN5AQ14524 2016 aa21.34■■□□□ 1.01
ATG3-208ENST00000495756 A0A1B0GUA9 196 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 ANKRD63C9JTQ0 380 aa21.33■■□□□ 1.01
ATG3-208ENST00000495756 TOM1L1O75674 476 aa21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms