RNA–Protein interactions for RNA: ENST00000495755.1

VPS52-221, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 453 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-221ENST00000495755 TFDP1Q14186 410 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 PDIA5Q14554 519 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 NBR1Q14596 966 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 TMEM184AQ6ZMB5 413 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 ADHFE1Q8IWW8 467 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 MRPL43Q8N983 215 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 SMG8Q8ND04 991 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 VN1R2Q8NFZ6 395 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 ERMNQ8TAM6 284 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 CCDC51Q96ER9 411 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 TMX3Q96JJ7 454 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 TCF25Q9BQ70 676 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 C1QTNF1Q9BXJ1 281 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 NRDE2Q9H7Z3 1164 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 TBC1D13Q9NVG8 400 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 NOL7Q9UMY1 257 aaKnown RBP8.02□□□□□ -1.13
VPS52-221ENST00000495755 CNTNAP2Q9UHC6 1331 aa8.02□□□□□ -1.13
VPS52-221ENST00000495755 ARID2Q68CP9 1835 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 FSD2A1L4K1 749 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 CARNS1A5YM72 827 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 NT5C1B-RDH14C9J2C7 533 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 INO80B-WBP1J3KQ70 363 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 INPPL1O15357 1258 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 B4GALT3O60512 393 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 USO1O60763 962 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 DDHD2O94830 711 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 ERLIN2O94905 339 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 ARF4P18085 180 aaPredicted RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 CYP11B2P19099 503 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 SSTR3P32745 418 aaPredicted RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 SLC11A1P49279 550 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 RBM10P98175 930 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 NCBP1Q09161 790 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 GNL2Q13823 731 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 IL17AQ16552 155 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 ECM1Q16610 540 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 PLPP4Q5VZY2 271 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 NOTUMQ6P988 496 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 POTEGQ6S5H5 508 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 PADI6Q6TGC4 694 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 TMC7Q7Z402 723 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 DDX53Q86TM3 631 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 TMEM173Q86WV6 379 aaPredicted RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 ZNF280BQ86YH2 543 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 SMRP1Q8NCR6 262 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 CNNM3Q8NE01 707 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 MCPH1Q8NEM0 835 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 BCL7CQ8WUZ0 217 aaPredicted RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 IGSF21Q96ID5 467 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 CCDC43Q96MW1 224 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 TBC1D32Q96NH3 1257 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 EIF2AQ9BY44 585 aaKnown RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 CSRNP2Q9H175 543 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 POLR3FQ9H1D9 316 aaPredicted RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 RNF39Q9H2S5 420 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 RSAD1Q9HA92 442 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 UBN1Q9NPG3 1134 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 GPRC5CQ9NQ84 441 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 ENTPD7Q9NQZ7 604 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 KANSL3Q9P2N6 904 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 DNAJB4Q9UDY4 337 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 BARX2Q9UMQ3 279 aaPredicted RBP8.01□□□□□ -1.13
VPS52-221ENST00000495755 INPP5FQ9Y2H2 1132 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 PCDHB6Q9Y5E3 794 aa8.01□□□□□ -1.13
VPS52-221ENST00000495755 WDFY4Q6ZS81 3184 aa8□□□□□ -1.13
VPS52-221ENST00000495755 A0A1B0GUA9 196 aa8□□□□□ -1.13
VPS52-221ENST00000495755 C2orf71A6NGG8 1288 aa8□□□□□ -1.13
VPS52-221ENST00000495755 B4GALT5O43286 388 aa8□□□□□ -1.13
VPS52-221ENST00000495755 ZC3H11AO75152 810 aaKnown RBP eCLIP8□□□□□ -1.13
VPS52-221ENST00000495755 CXCL14O95715 111 aa8□□□□□ -1.13
VPS52-221ENST00000495755 ITGA4P13612 1032 aa8□□□□□ -1.13
VPS52-221ENST00000495755 CCT6AP40227 531 aaKnown RBP8□□□□□ -1.13
VPS52-221ENST00000495755 MCM2P49736 904 aa8□□□□□ -1.13
VPS52-221ENST00000495755 RNASELQ05823 741 aaKnown RBP8□□□□□ -1.13
VPS52-221ENST00000495755 PTGDRQ13258 359 aa8□□□□□ -1.13
VPS52-221ENST00000495755 SMC1AQ14683 1233 aaKnown RBP8□□□□□ -1.13
VPS52-221ENST00000495755 CDCA2Q69YH5 1023 aaPredicted RBP8□□□□□ -1.13
VPS52-221ENST00000495755 ANKRD54Q6NXT1 300 aa8□□□□□ -1.13
VPS52-221ENST00000495755 SYCE2Q6PIF2 218 aa8□□□□□ -1.13
VPS52-221ENST00000495755 PPP4R3CPQ6ZMV5 832 aa8□□□□□ -1.13
VPS52-221ENST00000495755 MAEAQ7L5Y9 396 aa8□□□□□ -1.13
VPS52-221ENST00000495755 VPS52Q8N1B4 723 aa8□□□□□ -1.13
VPS52-221ENST00000495755 IGSF22Q8N9C0 903 aa8□□□□□ -1.13
VPS52-221ENST00000495755 URGCPQ8TCY9 931 aa8□□□□□ -1.13
VPS52-221ENST00000495755 SUSD6Q92537 303 aa8□□□□□ -1.13
VPS52-221ENST00000495755 TMEM169Q96HH4 297 aa8□□□□□ -1.13
VPS52-221ENST00000495755 CPB2Q96IY4 423 aa8□□□□□ -1.13
VPS52-221ENST00000495755 TMEM175Q9BSA9 504 aa8□□□□□ -1.13
VPS52-221ENST00000495755 VN1R3Q9BXE9 311 aa8□□□□□ -1.13
VPS52-221ENST00000495755 ZBP1Q9H171 429 aa8□□□□□ -1.13
VPS52-221ENST00000495755 S1PR5Q9H228 398 aa8□□□□□ -1.13
VPS52-221ENST00000495755 FZD8Q9H461 694 aa8□□□□□ -1.13
VPS52-221ENST00000495755 UPF2Q9HAU5 1272 aaKnown RBP8□□□□□ -1.13
VPS52-221ENST00000495755 C11orf16Q9NQ32 467 aa8□□□□□ -1.13
VPS52-221ENST00000495755 EIF4ENIF1Q9NRA8 985 aaKnown RBP8□□□□□ -1.13
VPS52-221ENST00000495755 LRWD1Q9UFC0 647 aa8□□□□□ -1.13
VPS52-221ENST00000495755 KIF3AQ9Y496 699 aa8□□□□□ -1.13
VPS52-221ENST00000495755 USP15Q9Y4E8 981 aaPredicted RBP8□□□□□ -1.13
VPS52-221ENST00000495755 IPPQ9Y573 584 aa8□□□□□ -1.13
VPS52-221ENST00000495755 IRAK3Q9Y616 596 aa8□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms