RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 SNW1Q13573 536 aaKnown RBP18.83■□□□□ 0.6
HDAC6-235ENST00000495515 TCTN1Q2MV58 587 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 TWF2Q6IBS0 349 aaKnown RBP18.83■□□□□ 0.6
HDAC6-235ENST00000495515 NOTUMQ6P988 496 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 STXBP4Q6ZWJ1 553 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 UNC13DQ70J99 1090 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 HAUS6Q7Z4H7 955 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 SFR1Q86XK3 245 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 TMEM161BQ8NDZ6 487 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 BLZF1Q9H2G9 400 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 MRPL44Q9H9J2 332 aaKnown RBP18.83■□□□□ 0.6
HDAC6-235ENST00000495515 OLFML3Q9NRN5 406 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 RGS18Q9NS28 235 aa18.83■□□□□ 0.6
HDAC6-235ENST00000495515 TSPAN1O60635 241 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 SKIP12755 728 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 CUL4BQ13620 913 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 ALCAMQ13740 583 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 DSC3Q14574 896 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 SLC24A5Q71RS6 500 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 APBB1IPQ7Z5R6 666 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-235ENST00000495515 GRAMD1CQ8IYS0 662 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 MYOCDQ8IZQ8 938 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 KCNN1Q92952 543 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 CCDC113Q9H0I3 377 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 ST6GALNAC4Q9H4F1 302 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 CXXC1Q9P0U4 656 aaPredicted RBP18.82■□□□□ 0.6
HDAC6-235ENST00000495515 SCN5AQ14524 2016 aa18.82■□□□□ 0.6
HDAC6-235ENST00000495515 CNTNAP2Q9UHC6 1331 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 LOC101059915A0A1B0GWI6 518 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-235ENST00000495515 NR1I2O75469 434 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 STAG3L1P0CL83 205 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 ATP2A2P16615 1042 aaKnown RBP18.81■□□□□ 0.6
HDAC6-235ENST00000495515 RAB27AP51159 221 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 COASYQ13057 564 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 AMHR2Q16671 573 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 ELOA2Q8IYF1 753 aaPredicted RBP18.81■□□□□ 0.6
HDAC6-235ENST00000495515 HVCN1Q96D96 273 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 TRAIPQ9BWF2 469 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 MRPL4Q9BYD3 311 aaKnown RBP18.81■□□□□ 0.6
HDAC6-235ENST00000495515 PCDHB13Q9Y5F0 798 aa18.81■□□□□ 0.6
HDAC6-235ENST00000495515 SIP14410 1827 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 N4BP3O15049 544 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 MGEA5O60502 916 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 ARF4P18085 180 aaPredicted RBP18.8■□□□□ 0.6
HDAC6-235ENST00000495515 HOXA11P31270 313 aaPredicted RBP18.8■□□□□ 0.6
HDAC6-235ENST00000495515 SARSP49591 514 aaKnown RBP18.8■□□□□ 0.6
HDAC6-235ENST00000495515 POSTNQ15063 836 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.8■□□□□ 0.6
HDAC6-235ENST00000495515 ZNF720Q7Z2F6 126 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 RTN4RL1Q86UN2 441 aaPredicted RBP18.8■□□□□ 0.6
HDAC6-235ENST00000495515 LINC01599Q8WXQ3 324 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 ADPGKQ9BRR6 497 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 EXOC1Q9NV70 894 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 LRFN2Q9ULH4 789 aa18.8■□□□□ 0.6
HDAC6-235ENST00000495515 A0A0U1RQF3 1178 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-235ENST00000495515 A0A1B0GUA9 196 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-235ENST00000495515 C9IYK1 514 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 B4GALT5O43286 388 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 SMC2O95347 1197 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 GCNT3O95395 438 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 CASP1P29466 404 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 NMT1P30419 496 aaKnown RBP18.79■□□□□ 0.6
HDAC6-235ENST00000495515 GTF2BQ00403 316 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 PSMD2Q13200 908 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 FAM26FQ5R3K3 315 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 SLC27A1Q6PCB7 646 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 NPAS4Q8IUM7 802 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 HACE1Q8IYU2 909 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 TOP1MTQ969P6 601 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 BICD1Q96G01 975 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 CPB2Q96IY4 423 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 FIZ1Q96SL8 496 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 ZBED2Q9BTP6 218 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 TRIM6Q9C030 488 aaPredicted RBP18.79■□□□□ 0.6
HDAC6-235ENST00000495515 ELAC1Q9H777 363 aaKnown RBP18.79■□□□□ 0.6
HDAC6-235ENST00000495515 LMBRD1Q9NUN5 540 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 TBC1D7Q9P0N9 293 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 TBX20Q9UMR3 447 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 EXOC7Q9UPT5 735 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 PCDHB7Q9Y5E2 793 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 TET1Q8NFU7 2136 aa18.79■□□□□ 0.6
HDAC6-235ENST00000495515 RPN1P04843 607 aaKnown RBP18.78■□□□□ 0.6
HDAC6-235ENST00000495515 FAM189BP81408 668 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 DEFB103AP81534 67 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 DPYDQ12882 1025 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 ATF7IP2Q5U623 682 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 ZPBP2Q6X784 338 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 HERC6Q8IVU3 1022 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 PGBD4Q96DM1 585 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 FAM105AQ9NUU6 356 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 RMND1Q9NWS8 449 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 TMEM161AQ9NX61 479 aa18.78■□□□□ 0.6
HDAC6-235ENST00000495515 HOXA2O43364 376 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 ZNF623O75123 536 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 UPP2O95045 317 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 EOMESO95936 686 aa18.77■□□□□ 0.6
HDAC6-235ENST00000495515 IBSPP21815 317 aaPredicted RBP18.77■□□□□ 0.6
HDAC6-235ENST00000495515 LRIT3Q3SXY7 679 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms