RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 SOCS5O75159 536 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 SMNDC1O75940 238 aaKnown RBP eCLIP10.05□□□□□ -0.81e-22■■■□□ 19
RPSA-209ENST00000495394 DDX58O95786 925 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 APOEP02649 317 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 SFPQP23246 707 aaKnown RBP eCLIP10.05□□□□□ -0.8
RPSA-209ENST00000495394 TRIM23P36406 574 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 GNAQP50148 359 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 THOP1P52888 689 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 ZNF445P59923 1031 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 BEX3Q00994 111 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 IL1RL1Q01638 556 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 KDSRQ06136 332 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 TRIM32Q13049 653 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 MTHFSDQ2M296 383 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 ANO4Q32M45 955 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 ZBTB41Q5SVQ8 909 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 SNX30Q5VWJ9 437 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 ARHGAP11AQ6P4F7 1023 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 HID1Q8IV36 788 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 REXO1L1PQ8IX06 675 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 NRSN1Q8IZ57 195 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 CADM3Q8N126 398 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 PCSK9Q8NBP7 692 aaKnown RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 FBXO30Q8TB52 745 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 HOOK2Q96ED9 719 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 BTBD6Q96KE9 485 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 CMTM3Q96MX0 182 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 C12orf10Q9HB07 376 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 PREBQ9HCU5 417 aa10.05□□□□□ -0.8
RPSA-209ENST00000495394 SUCLA2Q9P2R7 463 aaPredicted RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 CAB39Q9Y376 341 aaPredicted RBP10.05□□□□□ -0.8
RPSA-209ENST00000495394 ST8SIA5O15466 376 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 CFL1P23528 166 aaKnown RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 POLR2BP30876 1174 aaKnown RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 TM4SF4P48230 202 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 HADHBP55084 474 aaKnown RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 PURAQ00577 322 aaKnown RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 MOGQ16653 247 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 AKAP4Q5JQC9 854 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 FAM182BQ5T319 152 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 OR7E24Q6IFN5 339 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 FAM47EQ6ZV65 393 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 FAM83AQ86UY5 434 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 NLRP4Q96MN2 994 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 SLC39A2Q9NP94 309 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 GPHNQ9NQX3 736 aaPredicted RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 C8orf4Q9NR00 106 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 METTL5Q9NRN9 209 aaKnown RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 TRPM5Q9NZQ8 1165 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 FARP1Q9Y4F1 1045 aaPredicted RBP10.04□□□□□ -0.8
RPSA-209ENST00000495394 TELO2Q9Y4R8 837 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 PCDHB6Q9Y5E3 794 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 PCDHB4Q9Y5E5 795 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 BTAF1O14981 1849 aa10.04□□□□□ -0.8
RPSA-209ENST00000495394 LRRIQ3A6PVS8 624 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 EBAG9O00559 213 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 APOL1O14791 398 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 SIN3BO75182 1162 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 CD4P01730 458 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 LTA4HP09960 611 aaKnown RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 AXLP30530 894 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 PSMC4P43686 418 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 CD97P48960 835 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 OLR1P78380 273 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 ITGB3BPQ13352 177 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 ZNF362Q5T0B9 420 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 NCAPH2Q6IBW4 605 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 KLC3Q6P597 504 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 C1orf228Q6PIY5 440 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 MAMDC2Q7Z304 686 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 BNIPLQ7Z465 357 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 SRGAP1Q7Z6B7 1085 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 ATP6V1G3Q96LB4 118 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 GAL3ST1Q99999 423 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 PI4K2AQ9BTU6 479 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 LSM14BQ9BX40 385 aaKnown RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 UBE2OQ9C0C9 1292 aaKnown RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 CCSER1Q9C0I3 900 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 SH2B1Q9NRF2 756 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPSA-209ENST00000495394 ZBTB1Q9Y2K1 713 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 TRIM75PA6NK02 468 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 RGPD3A6NKT7 1758 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 GOLGA8JA6NMD2 632 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 KIF28PB7ZC32 967 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 GOLGA8TH3BQL2 631 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 IDH3BO43837 385 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 SIPA1L3O60292 1781 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 ECDO95905 644 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 GOLGA8HP0CJ92 632 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 CTRB1P17538 263 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 MAPK9P45984 424 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 ARFIP1P53367 373 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 SSTP61278 116 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 POLR2GP62487 172 aaKnown RBP eCLIP10.03□□□□□ -0.8
RPSA-209ENST00000495394 CAP1Q01518 475 aa10.03□□□□□ -0.8
RPSA-209ENST00000495394 PLOD1Q02809 727 aaPredicted RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 HABP4Q5JVS0 413 aaKnown RBP10.03□□□□□ -0.8
RPSA-209ENST00000495394 CTRB2Q6GPI1 263 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms