RNA–Protein interactions for RNA: ENST00000494742.5

PCCB-219, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 4

Gene PCCB, Length 547 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-219ENST00000494742 LONRF3Q496Y0 759 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 CYP26C1Q6V0L0 522 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 AGMOQ6ZNB7 445 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 CCDC149Q6ZUS6 474 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 ZNF280BQ86YH2 543 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 PSPC1Q8WXF1 523 aaKnown RBP16.37■□□□□ 0.21
PCCB-219ENST00000494742 SNX27Q96L92 541 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 KLHL5Q96PQ7 755 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 VN1R3Q9BXE9 311 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 GBP3Q9H0R5 595 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 MFSD1Q9H3U5 465 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 DHX33Q9H6R0 707 aaKnown RBP16.37■□□□□ 0.21
PCCB-219ENST00000494742 RSAD1Q9HA92 442 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 ZSWIM6Q9HCJ5 1215 aa16.37■□□□□ 0.21
PCCB-219ENST00000494742 MRPL17Q9NRX2 175 aaKnown RBP16.37■□□□□ 0.21
PCCB-219ENST00000494742 ZFHX2Q9C0A1 2572 aaPredicted RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 TBX3O15119 743 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 LILRB3O75022 631 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 P4HBP07237 508 aaKnown RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 GCFC2P16383 781 aaKnown RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 KLRC2P26717 231 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 TOB2Q14106 344 aaPredicted RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 PPP4R3AQ6IN85 833 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 KANK3Q6NY19 840 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 ELMSAN1Q6PJG2 1045 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 TMC5Q6UXY8 1006 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 CMASQ8NFW8 434 aaPredicted RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 TCP11Q8WWU5 503 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 PRPF31Q8WWY3 499 aaKnown RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 FAM193BQ96PV7 902 aaPredicted RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 NAP1L4Q99733 375 aaKnown RBP16.36■□□□□ 0.21
PCCB-219ENST00000494742 RHOBTB2Q9BYZ6 727 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 KCNMB3Q9NPA1 279 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 DPP7Q9UHL4 492 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 VAV3Q9UKW4 847 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 FAN1Q9Y2M0 1017 aa16.36■□□□□ 0.21
PCCB-219ENST00000494742 SPDYE4A6NLX3 237 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 EML1O00423 815 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 DDHD2O94830 711 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 C1RP00736 705 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 CNPP09543 421 aaKnown RBP16.35■□□□□ 0.21
PCCB-219ENST00000494742 NCLP19338 710 aaKnown RBP16.35■□□□□ 0.21
PCCB-219ENST00000494742 HOXA11P31270 313 aaPredicted RBP16.35■□□□□ 0.21
PCCB-219ENST00000494742 TDGQ13569 410 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 PLA2G4FQ68DD2 849 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 OTUD6AQ7L8S5 288 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 C4orf19Q8IY42 314 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 CEP170P1Q96L14 293 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 SMOC2Q9H3U7 446 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 CYP46A1Q9Y6A2 500 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 C2orf16Q68DN1 1984 aa16.35■□□□□ 0.21
PCCB-219ENST00000494742 NRP1O14786 923 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 INPPL1O15357 1258 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 SLC37A4O43826 429 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 B4GALT3O60512 393 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 SOD2P04179 222 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 SRGAP2CP0DJJ0 459 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 AXLP30530 894 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 NPEPPSP55786 919 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 FOXK2Q01167 660 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 LAMTOR4Q0VGL1 99 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 INF2Q27J81 1249 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 LETM2Q2VYF4 491 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 UBXN11Q5T124 520 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 NEK8Q86SG6 692 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 CCDC51Q96ER9 411 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 TM6SF1Q9BZW5 370 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 SLKQ9H2G2 1235 aaPredicted RBP16.34■□□□□ 0.21
PCCB-219ENST00000494742 IGSF9Q9P2J2 1179 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 DUSP12Q9UNI6 340 aa16.34■□□□□ 0.21
PCCB-219ENST00000494742 ARID2Q68CP9 1835 aa16.33■□□□□ 0.21
PCCB-219ENST00000494742 CCDC194A0A1B0GVG4 234 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 URODP06132 367 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 ADH1AP07327 375 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 XBP1P17861 261 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 POU5F1BQ06416 359 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 NCBP1Q09161 790 aaKnown RBP16.33■□□□□ 0.2
PCCB-219ENST00000494742 EPHA7Q15375 998 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 HDAC7Q8WUI4 952 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 TMEM143Q96AN5 459 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 RPS6KC1Q96S38 1066 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 RTP3Q9BQQ7 232 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 PHF20Q9BVI0 1012 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 HERC2P3Q9BVR0 1158 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 MINDY3Q9H8M7 445 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 KCNK12Q9HB15 430 aa16.33■□□□□ 0.2
PCCB-219ENST00000494742 CFAP54Q96N23 3096 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 PRR23AA6NEV1 266 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 NR1I2O75469 434 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 CDKL5O76039 1030 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 ERLIN2O94905 339 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 PAPLNO95428 1278 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 EFEMP2O95967 443 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 POMCP01189 267 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 ITGA4P13612 1032 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 AOC1P19801 751 aa16.32■□□□□ 0.2
PCCB-219ENST00000494742 YWHABP31946 246 aaKnown RBP16.32■□□□□ 0.2
PCCB-219ENST00000494742 AFF1P51825 1210 aaKnown RBP16.32■□□□□ 0.2
PCCB-219ENST00000494742 MXD4Q14582 209 aaPredicted RBP16.32■□□□□ 0.2
PCCB-219ENST00000494742 EMC2Q15006 297 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms