RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 EDIL3O43854 480 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 DTNBO60941 627 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 ALDH2P05091 517 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 ITGA4P13612 1032 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 GBP2P32456 591 aaPredicted RBP10.76□□□□□ -0.69
UBR4-216ENST00000494503 CYP4A11Q02928 519 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 NCBP1Q09161 790 aaKnown RBP10.76□□□□□ -0.69
UBR4-216ENST00000494503 TOB2Q14106 344 aaPredicted RBP10.76□□□□□ -0.69
UBR4-216ENST00000494503 XKR9Q5GH70 373 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 ELMSAN1Q6PJG2 1045 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 PIK3AP1Q6ZUJ8 805 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 OTOP3Q7RTS5 596 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 NEK8Q86SG6 692 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 EXOC8Q8IYI6 725 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 TMEM105Q8N8V8 129 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 RNF149Q8NC42 400 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 PRPF31Q8WWY3 499 aaKnown RBP10.76□□□□□ -0.69
UBR4-216ENST00000494503 RSPH1Q8WYR4 309 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 KCNB2Q92953 911 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 LXNQ9BS40 222 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 FAM186AA6NE01 2351 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 DENND4AQ7Z401 1863 aa10.76□□□□□ -0.69
UBR4-216ENST00000494503 PLXNA3P51805 1871 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 CYP3A7-CYP3A51PA0A087WV96 503 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 IGKV6-21A0A0C4DH24 114 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 INO80B-WBP1J3KQ70 363 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 B4GALT3O60512 393 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 NR1I2O75469 434 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 CDKL5O76039 1030 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 DDHD2O94830 711 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 P4HBP07237 508 aaKnown RBP10.75□□□□□ -0.69
UBR4-216ENST00000494503 CNPP09543 421 aaKnown RBP10.75□□□□□ -0.69
UBR4-216ENST00000494503 CYP3A7P24462 503 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 YWHABP31946 246 aaKnown RBP10.75□□□□□ -0.69
UBR4-216ENST00000494503 MLH1P40692 756 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 RFC5P40937 340 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 FOSBP53539 338 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 LAMTOR4Q0VGL1 99 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 CTTNQ14247 550 aaKnown RBP10.75□□□□□ -0.69
UBR4-216ENST00000494503 EMC2Q15006 297 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 ASTLQ6HA08 431 aaPredicted RBP10.75□□□□□ -0.69
UBR4-216ENST00000494503 GALNT17Q6IS24 598 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 AGMOQ6ZNB7 445 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 OTUD6AQ7L8S5 288 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 SRGAP1Q7Z6B7 1085 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 GLYCTKQ8IVS8 523 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 TPH2Q8IWU9 490 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 ZDHHC14Q8IZN3 488 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 ZNF579Q8NAF0 562 aaKnown RBP10.75□□□□□ -0.69
UBR4-216ENST00000494503 FEZF2Q8TBJ5 459 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 SLC22A17Q8WUG5 538 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 TCP11Q8WWU5 503 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 CPB2Q96IY4 423 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 KLHL5Q96PQ7 755 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 MTRQ99707 1265 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 AGXT2Q9BYV1 514 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 PIDD1Q9HB75 910 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 IFT122Q9HBG6 1241 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 MAN1C1Q9NR34 630 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 PDRG1Q9NUG6 133 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 KANSL3Q9P2N6 904 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 SPTBN4Q9H254 2564 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 CFAP54Q96N23 3096 aa10.75□□□□□ -0.69
UBR4-216ENST00000494503 NRP1O14786 923 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 ZNF623O75123 536 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 STBD1O95210 358 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 BAG4O95429 457 aaKnown RBP10.74□□□□□ -0.69
UBR4-216ENST00000494503 ADH1AP07327 375 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 CFHP08603 1231 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 SPATA31D3P0C874 917 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 CLCN4P51793 760 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 AFF1P51825 1210 aaKnown RBP10.74□□□□□ -0.69
UBR4-216ENST00000494503 PPP2R5CQ13362 524 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 TDGQ13569 410 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 TMEM132AQ24JP5 1023 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 MOXD1Q6UVY6 613 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 SPATA31D4Q6ZUB0 917 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 FRMD5Q7Z6J6 570 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 GPR149Q86SP6 731 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 POTEDQ86YR6 584 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 HACE1Q8IYU2 909 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 SIX5Q8N196 739 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 FBXL16Q8N461 479 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 DAGLBQ8NCG7 672 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 ZNF274Q96GC6 653 aaPredicted RBP10.74□□□□□ -0.69
UBR4-216ENST00000494503 DYDC2Q96IM9 177 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 FAM20AQ96MK3 541 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 CEP89Q96ST8 783 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 GAD1Q99259 594 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 TRAIPQ9BWF2 469 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 VN1R3Q9BXE9 311 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 MINDY3Q9H8M7 445 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 RGL1Q9NZL6 768 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 STK39Q9UEW8 545 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 VAV3Q9UKW4 847 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 USTQ9Y2C2 406 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 IRAK3Q9Y616 596 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 CNTNAP2Q9UHC6 1331 aa10.74□□□□□ -0.69
UBR4-216ENST00000494503 CCDC195A0A1B0GUA6 201 aa10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms