RNA–Protein interactions for RNA: ENST00000494467.1

ABCA1-204, Transcript of ATP binding cassette subfamily A member 1, human

TSL 3

Gene ABCA1, Length 807 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA1-204	ENST00000494467	ALPK3	Q96L96	1907 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	CCDC169	A6NNP5	214 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	ABLIM1	O14639	778 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	CALU	O43852	315 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	PRPF6	O94906	941 aa	Known RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	GNA14	O95837	355 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	DARS	P14868	501 aa	Known RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	RPL13	P26373	211 aa	Known RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	AXL	P30530	894 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	NLRP11	P59045	1033 aa	Known RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	ZNF200	P98182	395 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	KCNA1	Q09470	495 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	PTGIS	Q16647	500 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	MAPK6	Q16659	721 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	SLFN12L	Q6IEE8	588 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	TSHZ1	Q6ZSZ6	1077 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	RHPN2	Q8IUC4	686 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	USP38	Q8NB14	1042 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	CAGE1	Q8TC20	777 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	DHX38	Q92620	1227 aa	Known RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	TSG101	Q99816	390 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	CELF4	Q9BZC1	486 aa	Known RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	GCOM2	Q9BZD3	368 aa	Predicted RBP	10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	PTPRH	Q9HD43	1115 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	AGPAT3	Q9NRZ7	376 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	CTNND2	Q9UQB3	1225 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	NFE2L3	Q9Y4A8	694 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRIP11	Q15643	1979 aa		10.14	□□□□□ -0.79
ABCA1-204	ENST00000494467		A0A087WZ62	844 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467		A0A0B4J269	797 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	GOLGA6L3	A6NEY3	463 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	LRRIQ4	A6NIV6	560 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	PITPNM1	O00562	1244 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	SLC16A3	O15427	465 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	TOM1L1	O75674	476 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	TFRC	P02786	760 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	IQCF3	P0C7M6	154 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	EIF4B	P23588	611 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	EEF1G	P26641	437 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	ADSS	P30520	456 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	MRE11	P49959	708 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	MRPS6	P82932	125 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	SPAG1	Q07617	926 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	STRN3	Q13033	797 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	SLC39A4	Q6P5W5	647 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRAF7	Q6Q0C0	670 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	SLC39A5	Q6ZMH5	540 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	HS2ST1	Q7LGA3	356 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	LUZP1	Q86V48	1076 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	KSR1	Q8IVT5	923 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	AOPEP	Q8N6M6	819 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	DNAJB3	Q8WWF6	145 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	ZBTB10	Q96DT7	871 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	CCDC51	Q96ER9	411 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	BORCS6	Q96GS4	357 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	ACO2	Q99798	780 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRAIP	Q9BWF2	469 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	MRPL4	Q9BYD3	311 aa	Known RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	KIAA1586	Q9HCI6	787 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	MAPK8IP1	Q9UQF2	711 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	AKT3	Q9Y243	479 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	TNFSF13B	Q9Y275	285 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRPV2	Q9Y5S1	764 aa		10.13	□□□□□ -0.79
ABCA1-204	ENST00000494467		A0A1B0GUA9	196 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	TRIM49B	A6NDI0	452 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	BECN2	A8MW95	431 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	PMM2	O15305	246 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	FAM189A1	O60320	539 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	B4GALT4	O60513	344 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	CAPN15	O75808	1086 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	PARN	O95453	639 aa	Known RBP	10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	VTN	P04004	478 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	NR3C1	P04150	777 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	PRKCB	P05771	671 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	SRGAP2C	P0DJJ0	459 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	TPM4	P67936	248 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	MCL1	Q07820	350 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	KLHL10	Q6JEL2	608 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	APTX	Q7Z2E3	356 aa	Known RBP	10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	FRMD5	Q7Z6J6	570 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	FAM114A1	Q8IWE2	563 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	CSGALNACT2	Q8N6G5	542 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	WNT8B	Q93098	351 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	KIFC3	Q9BVG8	833 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	TMEM106C	Q9BVX2	250 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	MINDY3	Q9H8M7	445 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	GRPEL1	Q9HAV7	217 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	FANCL	Q9NW38	375 aa		10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	LIMA1	Q9UHB6	759 aa	Known RBP	10.12	□□□□□ -0.79
ABCA1-204	ENST00000494467	GOLGA6L19	H0YKK7	550 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	CETN3	O15182	167 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	TLR3	O15455	904 aa	Known RBP	10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	LDHA	P00338	332 aa	Known RBP	10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	CHRNA1	P02708	482 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	EDN1	P05305	212 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	ADRB2	P07550	413 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	NR2F2	P24468	414 aa		10.11	□□□□□ -0.79
ABCA1-204	ENST00000494467	CLDN10	P78369	228 aa		10.11	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 31 ms