RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 RINT1Q6NUQ1 792 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 KCNT2Q6UVM3 1135 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 AGMOQ6ZNB7 445 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 EP400NLQ6ZTU2 488 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 MRPL10Q7Z7H8 261 aaKnown RBP24.22■■□□□ 1.47
HPS3-207ENST00000494327 AK8Q96MA6 479 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 ZNF558Q96NG5 402 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 KIFC3Q9BVG8 833 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 TRIM6Q9C030 488 aaPredicted RBP24.22■■□□□ 1.47
HPS3-207ENST00000494327 CSRNP2Q9H175 543 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 C2orf40Q9H1Z8 148 aa24.22■■□□□ 1.47
HPS3-207ENST00000494327 PRMT7Q9NVM4 692 aaPredicted RBP24.22■■□□□ 1.47
HPS3-207ENST00000494327 ITGA4P13612 1032 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 MARCKSP29966 332 aaPredicted RBP24.21■■□□□ 1.47
HPS3-207ENST00000494327 RNASELQ05823 741 aaKnown RBP24.21■■□□□ 1.47
HPS3-207ENST00000494327 CSPP1Q1MSJ5 1256 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 TJAP1Q5JTD0 557 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 SMG8Q8ND04 991 aaKnown RBP24.21■■□□□ 1.47
HPS3-207ENST00000494327 CNNM3Q8NE01 707 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 MICAL1Q8TDZ2 1067 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 CCDC51Q96ER9 411 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 CALML4Q96GE6 196 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 APOL6Q9BWW8 343 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 ZSCAN16Q9H4T2 348 aaPredicted RBP24.21■■□□□ 1.47
HPS3-207ENST00000494327 RSAD1Q9HA92 442 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 IPPQ9Y573 584 aa24.21■■□□□ 1.47
HPS3-207ENST00000494327 KIAA1671Q9BY89 1806 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 HIP1RO75146 1068 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 NCLP19338 710 aaKnown RBP24.2■■□□□ 1.46
HPS3-207ENST00000494327 IRS1P35568 1242 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 LONP1P36776 959 aaKnown RBP24.2■■□□□ 1.46
HPS3-207ENST00000494327 RAD51AP2Q09MP3 1159 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 AAK1Q2M2I8 961 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 FOXD4L5Q5VV16 416 aaPredicted RBP24.2■■□□□ 1.46
HPS3-207ENST00000494327 C1orf186Q6ZWK4 172 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 RASSF8Q8NHQ8 419 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 URGCPQ8TCY9 931 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 FOXD4L4Q8WXT5 416 aaPredicted RBP24.2■■□□□ 1.46
HPS3-207ENST00000494327 GBP3Q9H0R5 595 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 FZD8Q9H461 694 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 IGFLR1Q9H665 355 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 USP20Q9Y2K6 914 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 HES2Q9Y543 173 aa24.2■■□□□ 1.46
HPS3-207ENST00000494327 CCDC169A6NNP5 214 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 NT5C1B-RDH14C9J2C7 533 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 ZC3H11AO75152 810 aaKnown RBP eCLIP24.19■■□□□ 1.46
HPS3-207ENST00000494327 NPTXRO95502 500 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 PRKCBP05771 671 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 PLA2G4BP0C869 781 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 ALDH7A1P49419 539 aaKnown RBP24.19■■□□□ 1.46
HPS3-207ENST00000494327 PTPAQ15257 358 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 MAPK6Q16659 721 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 TMEM119Q4V9L6 283 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 SLC27A1Q6PCB7 646 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 PPP4R3CPQ6ZMV5 832 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 PRIMPOLQ96LW4 560 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 COL25A1Q9BXS0 654 aaPredicted RBP24.19■■□□□ 1.46
HPS3-207ENST00000494327 RNF39Q9H2S5 420 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 UBE2ZQ9H832 354 aaPredicted RBP24.19■■□□□ 1.46
HPS3-207ENST00000494327 TBC1D13Q9NVG8 400 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 SPG21Q9NZD8 308 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 PCDHGC5Q9Y5F6 944 aa24.19■■□□□ 1.46
HPS3-207ENST00000494327 CNTNAP2Q9UHC6 1331 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 A0A1B0GUA9 196 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 TTLL13PA6NNM8 815 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 SFI1A8K8P3 1242 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 KCNQ1P51787 676 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 AFF1P51825 1210 aaKnown RBP24.18■■□□□ 1.46
HPS3-207ENST00000494327 PEX3P56589 373 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 BCAR1P56945 870 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 UBE3AQ05086 875 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 PRPF4BQ13523 1007 aaKnown RBP24.18■■□□□ 1.46
HPS3-207ENST00000494327 SPECC1Q5M775 1068 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 KCTD17Q8N5Z5 321 aa24.18■■□□□ 1.46
HPS3-207ENST00000494327 SYT2Q8N9I0 419 aaPredicted RBP24.18■■□□□ 1.46
HPS3-207ENST00000494327 PUF60Q9UHX1 559 aaKnown RBP24.18■■□□□ 1.46
HPS3-207ENST00000494327 POMCP01189 267 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 PPM1AP35813 382 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 KRT17Q04695 432 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 HYAL1Q12794 435 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 DHX8Q14562 1220 aaKnown RBP24.17■■□□□ 1.46
HPS3-207ENST00000494327 KARSQ15046 597 aaKnown RBP24.17■■□□□ 1.46
HPS3-207ENST00000494327 FAM187BQ17R55 369 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 RSPH1Q8WYR4 309 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 MRPS27Q92552 414 aaKnown RBP24.17■■□□□ 1.46
HPS3-207ENST00000494327 SYMPKQ92797 1274 aaKnown RBP24.17■■□□□ 1.46
HPS3-207ENST00000494327 DRC1Q96MC2 740 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 USP28Q96RU2 1077 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 NXF3Q9H4D5 531 aaKnown RBP24.17■■□□□ 1.46
HPS3-207ENST00000494327 NRDE2Q9H7Z3 1164 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 UBN1Q9NPG3 1134 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 TLR9Q9NR96 1032 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 CLDND1Q9NY35 253 aa24.17■■□□□ 1.46
HPS3-207ENST00000494327 UNC80Q8N2C7 3258 aa24.16■■□□□ 1.46
HPS3-207ENST00000494327 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP24.16■■□□□ 1.46
HPS3-207ENST00000494327 K7ERI5 159 aa24.16■■□□□ 1.46
HPS3-207ENST00000494327 ACKR2O00590 384 aa24.16■■□□□ 1.46
HPS3-207ENST00000494327 SLC26A4O43511 780 aa24.16■■□□□ 1.46
HPS3-207ENST00000494327 KCNA5P22460 613 aa24.16■■□□□ 1.46
HPS3-207ENST00000494327 AKAP5P24588 427 aa24.16■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms