RNA–Protein interactions for RNA: ENST00000494284.6

PHF3-205, Transcript of PHD finger protein 3, humanhuman

TSL 2

Gene PHF3, Length 2,854 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-205ENST00000494284 WNT7BP56706 349 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 BACE1P56817 501 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 H2AFVQ71UI9 128 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 TMEM130Q8N3G9 435 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 TPCN2Q8NHX9 752 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 LMO3Q8TAP4 145 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 UHMK1Q8TAS1 419 aaKnown RBP13.45□□□□□ -0.26
PHF3-205ENST00000494284 SEMA4DQ92854 862 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 RIT2Q99578 217 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 EDEM3Q9BZQ6 932 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 DMAC2Q9NW81 257 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 HSPBP1Q9NZL4 362 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 COG5Q9UP83 839 aa13.45□□□□□ -0.26
PHF3-205ENST00000494284 BUB1BO60566 1050 aaPredicted RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 CTNND1O60716 968 aaKnown RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 NR3C2P08235 984 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 STAT1P42224 750 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 MCTP2Q6DN12 878 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 LLGL2Q6P1M3 1020 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 SLC35G2Q8TBE7 412 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 SYN2Q92777 582 aaPredicted RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 ZBTB10Q96DT7 871 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 EIF3DO15371 548 aaKnown RBP eCLIP13.44□□□□□ -0.26
PHF3-205ENST00000494284 ECM2O94769 699 aaPredicted RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 FGGP02679 453 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 DLATP10515 647 aaKnown RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 SEC24CP53992 1094 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 ZNF280AP59817 542 aaPredicted RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 TREML2Q5T2D2 321 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 CCDC60Q8IWA6 550 aaPredicted RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 UBLCP1Q8WVY7 318 aaPredicted RBP13.44□□□□□ -0.26
PHF3-205ENST00000494284 STRA6Q9BX79 667 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 EHMT1Q9H9B1 1298 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 SYNPO2Q9UMS6 1093 aa13.44□□□□□ -0.26
PHF3-205ENST00000494284 BRCA1P38398 1863 aaKnown RBP13.43□□□□□ -0.26
PHF3-205ENST00000494284 SMIM23A6NLE4 172 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 SLC16A3O15427 465 aaKnown RBP13.43□□□□□ -0.26
PHF3-205ENST00000494284 GUCY2CP25092 1073 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 SOX5P35711 763 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 MARCKSL1P49006 195 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 DAB2IPQ5VWQ8 1189 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 FOXR2Q6PJQ5 311 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 FBXO41Q8TF61 875 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 GLG1Q92896 1179 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 METTL14Q9HCE5 456 aaKnown RBP13.43□□□□□ -0.26
PHF3-205ENST00000494284 ZNF214Q9UL59 606 aaPredicted RBP13.43□□□□□ -0.26
PHF3-205ENST00000494284 PLAAQ9Y263 795 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 TULP2O00295 520 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 CLSTN1O94985 981 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 NPTX2P47972 431 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 TNIP1Q15025 636 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 SLC39A4Q6P5W5 647 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 EMBQ6PCB8 327 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 LRRC57Q8N9N7 239 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 ZNF280CQ8ND82 737 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 CEP170P1Q96L14 293 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 RNPC3Q96LT9 517 aaKnown RBP13.43□□□□□ -0.26
PHF3-205ENST00000494284 MTFR1LQ9H019 292 aa13.43□□□□□ -0.26
PHF3-205ENST00000494284 DENND3A2RUS2 1198 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 ZBED4O75132 1171 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 SGPL1O95470 568 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PLS3P13797 630 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PAK2Q13177 524 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 TMEM63BQ5T3F8 832 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 CHADLQ6NUI6 762 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 SLC47A2Q86VL8 602 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PPM1KQ8N3J5 372 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PIK3R5Q8WYR1 880 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 TMEM143Q96AN5 459 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 A1CFQ9NQ94 594 aaKnown RBP13.42□□□□□ -0.26
PHF3-205ENST00000494284 GDF3Q9NR23 364 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 LARSQ9P2J5 1176 aaKnown RBP13.42□□□□□ -0.26
PHF3-205ENST00000494284 APEX2Q9UBZ4 518 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 ODF2LQ9ULJ1 636 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PLA2G6O60733 806 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 IVLP07476 585 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 VAMP7P51809 220 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 MTERF2Q49AM1 385 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 SEPT14Q6ZU15 432 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 VPS36Q86VN1 386 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 LPAR1Q92633 364 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 TMEM117Q9H0C3 514 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 TMEM51Q9NW97 253 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 SEPT9Q9UHD8 586 aaPredicted RBP13.42□□□□□ -0.26
PHF3-205ENST00000494284 CYP26A1O43174 497 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PPP1R12BO60237 982 aaPredicted RBP13.42□□□□□ -0.26
PHF3-205ENST00000494284 LIG3P49916 1009 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 TNNC1P63316 161 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 ZBTB41Q5SVQ8 909 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 DCAF12L1Q5VU92 463 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 ZNF572Q7Z3I7 529 aaPredicted RBP13.42□□□□□ -0.26
PHF3-205ENST00000494284 MCF2L2Q86YR7 1114 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 SCYL3Q8IZE3 742 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 SLC30A5Q8TAD4 765 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PCDHB18PQ96TA0 734 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 PICK1Q9NRD5 415 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 TSKSQ9UJT2 592 aa13.42□□□□□ -0.26
PHF3-205ENST00000494284 DCDC2CA8MYV0 355 aa13.41□□□□□ -0.26
PHF3-205ENST00000494284 TNFAIP1Q13829 316 aa13.41□□□□□ -0.26
PHF3-205ENST00000494284 TATDN2Q93075 761 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms