RNA–Protein interactions for RNA: ENST00000494255.5

TRA2A-209, Transcript of transformer 2 alpha homolog, humanhuman

TSL 1 (best)

Gene TRA2A, Length 1,653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2A-209ENST00000494255 STRN3Q13033 797 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 PRPF4BQ13523 1007 aaKnown RBP13.74□□□□□ -0.21
TRA2A-209ENST00000494255 AMHR2Q16671 573 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 SLC17A8Q8NDX2 589 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 STAMQ92783 540 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 LRCH3Q96II8 777 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 CPB2Q96IY4 423 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 NTPCRQ9BSD7 190 aaKnown RBP13.74□□□□□ -0.21
TRA2A-209ENST00000494255 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 CCDC113Q9H0I3 377 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 FZD8Q9H461 694 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 TMEM134Q9H6X4 195 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 ELAC1Q9H777 363 aaKnown RBP13.74□□□□□ -0.21
TRA2A-209ENST00000494255 ARHGAP28Q9P2N2 729 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 SERTAD1Q9UHV2 236 aa13.74□□□□□ -0.21
TRA2A-209ENST00000494255 A0A0U1RQF3 1178 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 FAM237AA0A1B0GTK4 181 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 K7ENM7 598 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 ACKR2O00590 384 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 N4BP3O15049 544 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 TRAK2O60296 914 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 ARF4P18085 180 aaPredicted RBP13.73□□□□□ -0.21
TRA2A-209ENST00000494255 SCP2P22307 547 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 HOXA11P31270 313 aaPredicted RBP13.73□□□□□ -0.21
TRA2A-209ENST00000494255 NDUFA8P51970 172 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 ASIC1P78348 528 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 FAM189BP81408 668 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 ECHDC2Q86YB7 292 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 FAM178BQ8IXR5 827 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 CCDC65Q8IXS2 484 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 PIAS4Q8N2W9 510 aaPredicted RBP13.73□□□□□ -0.21
TRA2A-209ENST00000494255 RNF169Q8NCN4 708 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 TIFAQ96CG3 184 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 DNAJC19Q96DA6 116 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 CCDC34Q96HJ3 373 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 TRAIPQ9BWF2 469 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 NKX2-4Q9H2Z4 354 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 PANK4Q9NVE7 773 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 TMEM161AQ9NX61 479 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 SEL1LQ9UBV2 794 aa13.73□□□□□ -0.21
TRA2A-209ENST00000494255 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 B4GALT5O43286 388 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 HOXA2O43364 376 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 EOMESO95936 686 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 ABCD1P33897 745 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 AFMP43652 599 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 NCKAP1LP55160 1127 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 HTRA4P83105 476 aaPredicted RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 SLC27A1Q6PCB7 646 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 HAUS6Q7Z4H7 955 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 APBB1IPQ7Z5R6 666 aaPredicted RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 SFR1Q86XK3 245 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 TMEM161BQ8NDZ6 487 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 MRPL4Q9BYD3 311 aaKnown RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 TRIM9Q9C026 710 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 TRIM6Q9C030 488 aaPredicted RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 GOLPH3LQ9H4A5 285 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 SLC28A3Q9HAS3 691 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 FAM105AQ9NUU6 356 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 YBX2Q9Y2T7 364 aaKnown RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 TMEM265A0A087WTH1 108 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 ACTN4O43707 911 aaKnown RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 MAPTP10636 758 aaKnown RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 MYOGP15173 224 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 FXR1P51114 621 aaKnown RBP eCLIP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 LONRF3Q496Y0 759 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 HERC4Q5GLZ8 1057 aaPredicted RBP13.72□□□□□ -0.21
TRA2A-209ENST00000494255 HACE1Q8IYU2 909 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 CNNM3Q8NE01 707 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 PGBD4Q96DM1 585 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 C7orf25Q9BPX7 421 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 ADPGKQ9BRR6 497 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 PCDHB2Q9Y5E7 798 aa13.72□□□□□ -0.21
TRA2A-209ENST00000494255 A0A1B0GUA9 196 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 DGKIO75912 1065 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 ZNF202O95125 648 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 CA3P07451 260 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 UBXN11Q5T124 520 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 ZNF697Q5TEC3 545 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 ATF7IP2Q5U623 682 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 PPP2R2DQ66LE6 453 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 GPR153Q6NV75 609 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 CNNM4Q6P4Q7 775 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 ABI1Q8IZP0 508 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 CRIPAKQ8N1N5 446 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 BICD1Q96G01 975 aa13.71□□□□□ -0.21
TRA2A-209ENST00000494255 MRPL44Q9H9J2 332 aaKnown RBP13.71□□□□□ -0.21
TRA2A-209ENST00000494255 ZNF623O75123 536 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 NPTXRO95502 500 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 NMT1P30419 496 aaKnown RBP13.7□□□□□ -0.22
TRA2A-209ENST00000494255 FAM160A1Q05DH4 1040 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 COASYQ13057 564 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 BTG3Q14201 252 aaPredicted RBP13.7□□□□□ -0.22
TRA2A-209ENST00000494255 NT5DC1Q5TFE4 455 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 TAS1R3Q7RTX0 852 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 ZNF598Q86UK7 904 aaKnown RBP13.7□□□□□ -0.22
TRA2A-209ENST00000494255 CDR2LQ86X02 465 aaPredicted RBP13.7□□□□□ -0.22
TRA2A-209ENST00000494255 GRAMD1CQ8IYS0 662 aa13.7□□□□□ -0.22
TRA2A-209ENST00000494255 CMTR2Q8IYT2 770 aaKnown RBP13.7□□□□□ -0.22
TRA2A-209ENST00000494255 FIBCD1Q8N539 461 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms