RNA–Protein interactions for RNA: ENST00000494183.5

COL25A1-204, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5

Gene COL25A1, Length 4,630 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-204ENST00000494183 NFRKBQ6P4R8 1299 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 CENPUQ71F23 418 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 GDAP1Q8TB36 358 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 GCNAQ96QF7 691 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 CHP1Q99653 195 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 DDTLA6NHG4 134 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-204ENST00000494183 PODXLO00592 558 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 ATP8B1O43520 1251 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 MXD4Q14582 209 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-204ENST00000494183 KLHL8Q9P2G9 620 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-204ENST00000494183 STAP1Q9ULZ2 295 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 AGAP1Q9UPQ3 857 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 TXNDC9O14530 226 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 MAFGO15525 162 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SLC25A27O95847 323 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SOX5P35711 763 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 GPRC5AQ8NFJ5 357 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 EDEM3Q9BZQ6 932 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 DDX47Q9H0S4 455 aaKnown RBP12.47□□□□□ -0.41
COL25A1-204ENST00000494183 VCX3BQ9H321 246 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 CAPN11Q9UMQ6 739 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 NCOA3Q9Y6Q9 1424 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SPDYE2BA6NHP3 402 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 USP27XA6NNY8 438 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 CREB3O43889 395 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SUN1O94901 812 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SPDYE6P0CI01 402 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 MYBP10242 640 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 CA4P22748 312 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 NNTQ13423 1086 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 ADGRA1Q86SQ6 560 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SCYL3Q8IZE3 742 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 FAF2Q96CS3 445 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 LRRIQ1Q96JM4 1722 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 NCAPGQ9BPX3 1015 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 RTFDC1Q9BY42 306 aaPredicted RBP12.47□□□□□ -0.41
COL25A1-204ENST00000494183 UBN1Q9NPG3 1134 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 HDAC6Q9UBN7 1215 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 SNX9Q9Y5X1 595 aa12.47□□□□□ -0.41
COL25A1-204ENST00000494183 CELF2O95319 508 aaKnown RBP12.46□□□□□ -0.41
COL25A1-204ENST00000494183 GH1P01241 217 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 LRRC71Q8N4P6 559 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 NUF2Q9BZD4 464 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 IRX2Q9BZI1 471 aaPredicted RBP12.46□□□□□ -0.41
COL25A1-204ENST00000494183 MTFR1LQ9H019 292 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 TUBE1Q9UJT0 475 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 ZC3H13Q5T200 1668 aaKnown RBP12.46□□□□□ -0.41
COL25A1-204ENST00000494183 NAA25Q14CX7 972 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 URGCPQ8TCY9 931 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 CFAP36Q96G28 342 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 NUDCD1Q96RS6 583 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 TIPINQ9BVW5 301 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 SIK2Q9H0K1 926 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 LIMA1Q9UHB6 759 aaKnown RBP12.46□□□□□ -0.41
COL25A1-204ENST00000494183 ANGPTL3Q9Y5C1 460 aa12.46□□□□□ -0.41
COL25A1-204ENST00000494183 DCCP43146 1447 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 WDR91A4D1P6 747 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 PLS3P13797 630 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 PMLP29590 882 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 SNRNP35Q16560 246 aaKnown RBP12.46□□□□□ -0.42
COL25A1-204ENST00000494183 PDXDC1Q6P996 788 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 EMBQ6PCB8 327 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 FBXO38Q6PIJ6 1188 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 TTC13Q8NBP0 860 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 PDLIM2Q96JY6 352 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 MOV10L1Q9BXT6 1211 aaKnown RBP12.46□□□□□ -0.42
COL25A1-204ENST00000494183 AGPAT5Q9NUQ2 364 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 DONSONQ9NYP3 566 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 CAPN7Q9Y6W3 813 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 LRRC31Q6UY01 552 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 CATSPER3Q86XQ3 398 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 OSBPL9Q96SU4 736 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 TTC1Q99614 292 aa12.46□□□□□ -0.42
COL25A1-204ENST00000494183 TACO1Q9BSH4 297 aaKnown RBP12.46□□□□□ -0.42
COL25A1-204ENST00000494183 USP32Q8NFA0 1604 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 ESYT3A0FGR9 886 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 MOCS2O96007 188 aaPredicted RBP12.45□□□□□ -0.42
COL25A1-204ENST00000494183 SCP2P22307 547 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 AP3M2P53677 418 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 IRX4P78413 519 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 CUL1Q13616 776 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 EMC2Q15006 297 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 GNASQ5JWF2 1037 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 TTC39CQ8N584 583 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 CHST13Q8NET6 341 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL25A1-204ENST00000494183 KLC2Q9H0B6 622 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 SAYSD1Q9NPB0 183 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 CETPP11597 493 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 FXR1P51114 621 aaKnown RBP eCLIP12.45□□□□□ -0.42
COL25A1-204ENST00000494183 CASP7P55210 303 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 BCAR1P56945 870 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 KCNH4Q9UQ05 1017 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 PREX1Q8TCU6 1659 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 A0A1B0GTH6 734 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 MAGEB2O15479 319 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 CPB1P15086 417 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 UCHL3P15374 230 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 FMO5P49326 533 aa12.45□□□□□ -0.42
COL25A1-204ENST00000494183 NBPF12Q5TAG4 269 aaPredicted RBP12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms