RNA–Protein interactions for RNA: ENST00000493952.2

SATB1-217, Transcript of SATB homeobox 1, humanhuman

TSL 3 BASIC

Gene SATB1, Length 626 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-217ENST00000493952 CWH43Q9H720 699 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 BLOC1S4Q9NUP1 217 aa17.86■□□□□ 0.45
SATB1-217ENST00000493952 MORC2Q9Y6X9 1032 aaPredicted RBP17.86■□□□□ 0.45
SATB1-217ENST00000493952 GRM6O15303 877 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 EDN1P05305 212 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 PLCG1P19174 1290 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 RAD51AP2Q09MP3 1159 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 STK38Q15208 465 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 FAM187BQ17R55 369 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 SPOUT1Q5T280 376 aaKnown RBP17.85■□□□□ 0.45
SATB1-217ENST00000493952 PPP4R3CPQ6ZMV5 832 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 AGMOQ6ZNB7 445 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 MRPL10Q7Z7H8 261 aaKnown RBP17.85■□□□□ 0.45
SATB1-217ENST00000493952 CDR2LQ86X02 465 aaPredicted RBP17.85■□□□□ 0.45
SATB1-217ENST00000493952 RASSF8Q8NHQ8 419 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 DEPTORQ8TB45 409 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 P2RX5Q93086 422 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 MRPL38Q96DV4 380 aaKnown RBP17.85■□□□□ 0.45
SATB1-217ENST00000493952 CCDC51Q96ER9 411 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 IFT74Q96LB3 600 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 PRIMPOLQ96LW4 560 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 CCSER1Q9C0I3 900 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 PRDM6Q9NQX0 595 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 PRMT7Q9NVM4 692 aaPredicted RBP17.85■□□□□ 0.45
SATB1-217ENST00000493952 TFIP11Q9UBB9 837 aaKnown RBP17.85■□□□□ 0.45
SATB1-217ENST00000493952 PRUNE2Q8WUY3 3088 aa17.85■□□□□ 0.45
SATB1-217ENST00000493952 CNTNAP2Q9UHC6 1331 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 TTLL13PA6NNM8 815 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 GUCY2CP25092 1073 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 PEX3P56589 373 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 NCBP1Q09161 790 aaKnown RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 FOXD4L6Q3SYB3 417 aaPredicted RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 FOXD4L3Q6VB84 417 aaPredicted RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 KLHL23Q8NBE8 558 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 COLGALT1Q8NBJ5 622 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 SMG8Q8ND04 991 aaKnown RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 SYMPKQ92797 1274 aaKnown RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 PGBD4Q96DM1 585 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 DRC1Q96MC2 740 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 ZNF396Q96N95 335 aaPredicted RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 ALG13Q9NP73 1137 aaKnown RBP17.84■□□□□ 0.45
SATB1-217ENST00000493952 IPPQ9Y573 584 aa17.84■□□□□ 0.45
SATB1-217ENST00000493952 TCF20Q9UGU0 1960 aaKnown RBP17.83■□□□□ 0.44
SATB1-217ENST00000493952 NPHP3-ACAD11A0A0J9YXS1 232 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 A0A1B0GUA9 196 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 SFI1A8K8P3 1242 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 ITGB1P05556 798 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 PRKCBP05771 671 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 LIG1P18858 919 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 NCLP19338 710 aaKnown RBP17.83■□□□□ 0.44
SATB1-217ENST00000493952 NPTX2P47972 431 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 DHX8Q14562 1220 aaKnown RBP17.83■□□□□ 0.44
SATB1-217ENST00000493952 MAPK6Q16659 721 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 PTPROQ16827 1216 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 NAALADL2Q58DX5 795 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 ARSHQ5FYA8 562 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 GLB1LQ6UWU2 654 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 KRI1Q8N9T8 703 aaKnown RBP17.83■□□□□ 0.44
SATB1-217ENST00000493952 LINC00301Q8NCQ3 95 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 RAD54LQ92698 747 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 TIPINQ9BVW5 301 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 MRPL9Q9BYD2 267 aaKnown RBP17.83■□□□□ 0.44
SATB1-217ENST00000493952 LMAN2LQ9H0V9 348 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 AAASQ9NRG9 546 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 KCND2Q9NZV8 630 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 PLAGL2Q9UPG8 496 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 USP20Q9Y2K6 914 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 HES2Q9Y543 173 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 PCDHB12Q9Y5F1 795 aa17.83■□□□□ 0.44
SATB1-217ENST00000493952 UNC80Q8N2C7 3258 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 CCDC169A6NNP5 214 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 OFD1O75665 1012 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 NPTXRO95502 500 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 LAG3P18627 525 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 DNAJB1P25685 340 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 PBX3P40426 434 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 CACNB1Q02641 598 aaPredicted RBP17.82■□□□□ 0.44
SATB1-217ENST00000493952 DMP1Q13316 513 aaPredicted RBP17.82■□□□□ 0.44
SATB1-217ENST00000493952 PRPF4BQ13523 1007 aaKnown RBP17.82■□□□□ 0.44
SATB1-217ENST00000493952 MCM6Q14566 821 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 SLC27A1Q6PCB7 646 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 GPBP1Q86WP2 473 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.82■□□□□ 0.44
SATB1-217ENST00000493952 SLC17A8Q8NDX2 589 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 CNNM3Q8NE01 707 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 LARP4BQ92615 738 aaKnown RBP17.82■□□□□ 0.44
SATB1-217ENST00000493952 RNF39Q9H2S5 420 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 RSAD1Q9HA92 442 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 C17orf75Q9HAS0 396 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 KMT5AQ9NQR1 393 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 TBC1D13Q9NVG8 400 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 INPP5FQ9Y2H2 1132 aa17.82■□□□□ 0.44
SATB1-217ENST00000493952 PHLPP2Q6ZVD8 1323 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 ACKR2O00590 384 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 SPTLC2O15270 562 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 PPP6R2O75170 966 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 CSPG5O95196 566 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 YEATS4O95619 227 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 ITGA4P13612 1032 aa17.81■□□□□ 0.44
SATB1-217ENST00000493952 EFNA5P52803 228 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms