RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 ZNF558Q96NG5 402 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 FZD8Q9H461 694 aa25.03■■□□□ 1.6
SNIP1-203ENST00000493916 PLXNA4Q9HCM2 1894 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 B4GALT5O43286 388 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 OFD1O75665 1012 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 FGF18O76093 207 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 PPM1AP35813 382 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 COL19A1Q14993 1142 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 ZRSR1Q15695 479 aaKnown RBP25.02■■□□□ 1.6
SNIP1-203ENST00000493916 LONRF3Q496Y0 759 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 NOMO2Q5JPE7 1267 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 KCNT2Q6UVM3 1135 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 CABP7Q86V35 215 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 SMG8Q8ND04 991 aaKnown RBP25.02■■□□□ 1.6
SNIP1-203ENST00000493916 DEPTORQ8TB45 409 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 POF1BQ8WVV4 589 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 CDK5RAP3Q96JB5 506 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 RUSC1Q9BVN2 902 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 TIPINQ9BVW5 301 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 EIF2AQ9BY44 585 aaKnown RBP25.02■■□□□ 1.6
SNIP1-203ENST00000493916 CCDC113Q9H0I3 377 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 ZSCAN16Q9H4T2 348 aaPredicted RBP25.02■■□□□ 1.6
SNIP1-203ENST00000493916 UBN1Q9NPG3 1134 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 LZTS1Q9Y250 596 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 CLIC4Q9Y696 253 aa25.02■■□□□ 1.6
SNIP1-203ENST00000493916 A0A1B0GUA9 196 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 PLCB3Q01970 1234 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 TFF2Q03403 129 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 PTPAQ15257 358 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 RINT1Q6NUQ1 792 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 C1orf186Q6ZWK4 172 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 DRC1Q96MC2 740 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 RSAD1Q9HA92 442 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 IPPQ9Y573 584 aa25.01■■□□□ 1.59
SNIP1-203ENST00000493916 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP25■■□□□ 1.59
SNIP1-203ENST00000493916 CARNS1A5YM72 827 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 GUCY2CP25092 1073 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 EFNA5P52803 228 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 MAPK6Q16659 721 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 SLC27A1Q6PCB7 646 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 SYT2Q8N9I0 419 aaPredicted RBP25■■□□□ 1.59
SNIP1-203ENST00000493916 SYMPKQ92797 1274 aaKnown RBP25■■□□□ 1.59
SNIP1-203ENST00000493916 UBE2ZQ9H832 354 aaPredicted RBP25■■□□□ 1.59
SNIP1-203ENST00000493916 TBC1D13Q9NVG8 400 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 KCND2Q9NZV8 630 aa25■■□□□ 1.59
SNIP1-203ENST00000493916 MORC2Q9Y6X9 1032 aaPredicted RBP25■■□□□ 1.59
SNIP1-203ENST00000493916 INPPL1O15357 1258 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 NCK2O43639 380 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 HIP1RO75146 1068 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 UBA7P41226 1012 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 SLC12A3P55017 1021 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 GRIN1Q05586 938 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 FAM173BQ6P4H8 233 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 DAW1Q8N136 415 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 URGCPQ8TCY9 931 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 CALML4Q96GE6 196 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 COL25A1Q9BXS0 654 aaPredicted RBP24.99■■□□□ 1.59
SNIP1-203ENST00000493916 TLR9Q9NR96 1032 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 SPG21Q9NZD8 308 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 INPP5FQ9Y2H2 1132 aa24.99■■□□□ 1.59
SNIP1-203ENST00000493916 ZMYM2Q9UBW7 1377 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 PRKCBP05771 671 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 ITGA4P13612 1032 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 PDIA4P13667 645 aaKnown RBP24.98■■□□□ 1.59
SNIP1-203ENST00000493916 IRS1P35568 1242 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 PBX3P40426 434 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 BCAR1P56945 870 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 MAPK7Q13164 816 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 HACE1Q8IYU2 909 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 SLC39A11Q8N1S5 342 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 MRPS27Q92552 414 aaKnown RBP24.98■■□□□ 1.59
SNIP1-203ENST00000493916 PPP2R3CQ969Q6 453 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 PABPC5Q96DU9 382 aaKnown RBP24.98■■□□□ 1.59
SNIP1-203ENST00000493916 PLIN2Q99541 437 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 KIFC3Q9BVG8 833 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 TRIM6Q9C030 488 aaPredicted RBP24.98■■□□□ 1.59
SNIP1-203ENST00000493916 C17orf75Q9HAS0 396 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 POLD4Q9HCU8 107 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 KANSL3Q9P2N6 904 aa24.98■■□□□ 1.59
SNIP1-203ENST00000493916 DAXXQ9UER7 740 aaPredicted RBP24.98■■□□□ 1.59
SNIP1-203ENST00000493916 DLL1O00548 723 aa24.97■■□□□ 1.59
SNIP1-203ENST00000493916 ACKR2O00590 384 aa24.97■■□□□ 1.59
SNIP1-203ENST00000493916 N4BP3O15049 544 aa24.97■■□□□ 1.59
SNIP1-203ENST00000493916 HSP90AA1P07900 732 aaKnown RBP24.97■■□□□ 1.59
SNIP1-203ENST00000493916 PLA2G4BP0C869 781 aa24.97■■□□□ 1.59
SNIP1-203ENST00000493916 ALDH7A1P49419 539 aaKnown RBP24.97■■□□□ 1.59
SNIP1-203ENST00000493916 HYAL1Q12794 435 aa24.97■■□□□ 1.59
SNIP1-203ENST00000493916 PRPF4BQ13523 1007 aaKnown RBP24.97■■□□□ 1.59
SNIP1-203ENST00000493916 PDE12Q6L8Q7 609 aaKnown RBP24.97■■□□□ 1.59
SNIP1-203ENST00000493916 NRDE2Q9H7Z3 1164 aa24.97■■□□□ 1.59
SNIP1-203ENST00000493916 FBXO2Q9UK22 296 aaPredicted RBP24.97■■□□□ 1.59
SNIP1-203ENST00000493916 PHLPP2Q6ZVD8 1323 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 FSCN2O14926 492 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 ZC3H11AO75152 810 aaKnown RBP eCLIP24.96■■□□□ 1.59
SNIP1-203ENST00000493916 CSPG5O95196 566 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 NPTXRO95502 500 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 SSBP05455 408 aaKnown RBP eCLIP24.96■■□□□ 1.59
SNIP1-203ENST00000493916 NPTX2P47972 431 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 KRT17Q04695 432 aa24.96■■□□□ 1.59
SNIP1-203ENST00000493916 RNASELQ05823 741 aaKnown RBP24.96■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms