RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 UTP11Q9Y3A2 253 aaKnown RBP10.44□□□□□ -0.74
NPHP3-209ENST00000493732 C19orf81C9J6K1 198 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 FOXN3O00409 490 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 VWA5AO00534 786 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 KIAA0391O15091 583 aaKnown RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 BUB1BO60566 1050 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 RTN2O75298 545 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PPFIA4O75335 1185 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 GGPS1O95749 300 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 MYCLP12524 364 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 GBP1P32455 592 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PEX3P56589 373 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 GPC5P78333 572 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PLS1Q14651 629 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 SPDYCQ5MJ68 293 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 KRT39Q6A163 491 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 ENOSF1Q7L5Y1 443 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 VSIG10LQ86VR7 867 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 MAP4K3Q8IVH8 894 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 RDH13Q8NBN7 331 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 NSUN6Q8TEA1 469 aaKnown RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 RUNDC3BQ96NL0 473 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 RPS6KC1Q96S38 1066 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 FAM107BQ9H098 131 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 RPAP3Q9H6T3 665 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 KIAA1586Q9HCI6 787 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 SEPT11Q9NVA2 429 aaKnown RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PKD2L1Q9P0L9 805 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 COL4A5P29400 1685 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 NFASCO94856 1347 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 SYNGAP1Q96PV0 1343 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 TESPA1A2RU30 521 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 HMGB1P1B2RPK0 211 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 ZC3H11AO75152 810 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PSAPP07602 524 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 ZBTB48P10074 688 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 BACE1P56817 501 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 SKOR1P84550 965 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 HLTFQ14527 1009 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 FAM102BQ5T8I3 360 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 EMC10Q5UCC4 262 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 MAEAQ7L5Y9 396 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 EFCAB13Q8IY85 973 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 SCYL3Q8IZE3 742 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 ARFGAP2Q8N6H7 521 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 CASKIN2Q8WXE0 1202 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 ZFP91Q96JP5 570 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 CAPS2Q9BXY5 557 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PCIF1Q9H4Z3 704 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 PICK1Q9NRD5 415 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 HOMER2Q9NSB8 354 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 RNF146Q9NTX7 359 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 FRMD4AQ9P2Q2 1039 aaPredicted RBP10.43□□□□□ -0.74
NPHP3-209ENST00000493732 TBX20Q9UMR3 447 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 COQ4Q9Y3A0 265 aa10.43□□□□□ -0.74
NPHP3-209ENST00000493732 FAM187AA6NFU0 413 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 CCDC169A6NNP5 214 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 BHMG1C9JSJ3 638 aaPredicted RBP10.42□□□□□ -0.74
NPHP3-209ENST00000493732 ATP2A1O14983 1001 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 SLC16A4O15374 487 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 DGAT1O75907 488 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 MTA2O94776 668 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 NR3C2P08235 984 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 GARTP22102 1010 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 RNASE9P60153 205 aaKnown RBP10.42□□□□□ -0.74
NPHP3-209ENST00000493732 PPP3CAQ08209 521 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 MTMR2Q13614 643 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 DHX34Q14147 1143 aaKnown RBP10.42□□□□□ -0.74
NPHP3-209ENST00000493732 SNRNP35Q16560 246 aaKnown RBP10.42□□□□□ -0.74
NPHP3-209ENST00000493732 GNPTABQ3T906 1256 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 BRDTQ58F21 947 aaPredicted RBP10.42□□□□□ -0.74
NPHP3-209ENST00000493732 NSMFQ6X4W1 530 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 RUFY4Q6ZNE9 571 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 FAM71AQ8IYT1 594 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 RIN2Q8WYP3 895 aaPredicted RBP10.42□□□□□ -0.74
NPHP3-209ENST00000493732 SEC14L1Q92503 715 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 C12orf42Q96LP6 360 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 ZIM3Q96PE6 472 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 CBWD1Q9BRT8 395 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 PLVAPQ9BX97 442 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 IKZF4Q9H2S9 585 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 TMEM8AQ9HCN3 771 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 KMT5AQ9NQR1 393 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 CTTNBP2NLQ9P2B4 639 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 RASAL2Q9UJF2 1139 aa10.42□□□□□ -0.74
NPHP3-209ENST00000493732 BACH1O14867 736 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 FTLP02792 175 aaPredicted RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 ABCB4P21439 1286 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 CNGA1P29973 690 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 GCLMP48507 274 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 GPC3P51654 580 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 PTENP60484 403 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 APOBEC3FQ8IUX4 373 aaKnown RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 TSEN2Q8NCE0 465 aaKnown RBP10.41□□□□□ -0.74
NPHP3-209ENST00000493732 ZNF280CQ8ND82 737 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 TMEM161BQ8NDZ6 487 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 OLIG1Q8TAK6 271 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 KCNN1Q92952 543 aa10.41□□□□□ -0.74
NPHP3-209ENST00000493732 IFT74Q96LB3 600 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms