RNA–Protein interactions for RNA: ENST00000493669.2

PHACTR4-204, Transcript of phosphatase and actin regulator 4, humanhuman

TSL 1 (best)

Gene PHACTR4, Length 3,078 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR4-204ENST00000493669 KIAA1586Q9HCI6 787 aa11.72□□□□□ -0.53
PHACTR4-204ENST00000493669 ZC3H4Q9UPT8 1303 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 MYH9P35579 1960 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 SPDYE4A6NLX3 237 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 DDX3XO00571 662 aaKnown RBP eCLIP11.71□□□□□ -0.534e-12■□□□□ 10
PHACTR4-204ENST00000493669 PALMO75781 387 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 ADSSP30520 456 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 PAFAH1B1P43034 410 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 DLG4P78352 724 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 EMC2Q15006 297 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 MEI1Q5TIA1 1274 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 CYFIP1Q7L576 1253 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 NCAPG2Q86XI2 1143 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 AFAP1L1Q8TED9 768 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 LMBR1Q8WVP7 490 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 CALR3Q96L12 384 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 MFSD14AQ96MC6 490 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 PNKPQ96T60 521 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 POLR3FQ9H1D9 316 aaPredicted RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 COQ4Q9Y3A0 265 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 LRRC37A2A6NM11 1700 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 DOCK5Q9H7D0 1870 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 SOWAHBA6NEL2 793 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 CNMDO75829 334 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 TBC1D8O95759 1140 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 RHOXF2BP0C7M4 288 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 UBA1P22314 1058 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 POLGP54098 1239 aaPredicted RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 LONRF2Q1L5Z9 754 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 FAM160B1Q5W0V3 765 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 PHLDB3Q6NSJ2 640 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 RHOXF2Q9BQY4 288 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 PACSIN1Q9BY11 444 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 DHX33Q9H6R0 707 aaKnown RBP11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 TMEM8AQ9HCN3 771 aa11.71□□□□□ -0.53
PHACTR4-204ENST00000493669 MYH10P35580 1976 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 GRID2IPA4D2P6 1211 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 ANKRD63C9JTQ0 380 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 FARP2O94887 1054 aaPredicted RBP11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 ADRB2P07550 413 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 OSBPP22059 807 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 CBX1P83916 185 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 CCDC181Q5TID7 509 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 KRT39Q6A163 491 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 NFRKBQ6P4R8 1299 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 PARD3BQ8TEW8 1205 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 SYT17Q9BSW7 474 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 TMEM117Q9H0C3 514 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 PORCNQ9H237 461 aa11.71□□□□□ -0.54
PHACTR4-204ENST00000493669 NCANO14594 1321 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 UNCXA6NJT0 531 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 PDE2AO00408 941 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 ZNF185O15231 689 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 PIGRP01833 764 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 NAMPTP43490 491 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 GCLMP48507 274 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 SP4Q02446 784 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 MTERF2Q49AM1 385 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 CFAP221Q4G0U5 840 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 BEND6Q5SZJ8 279 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 SEPT14Q6ZU15 432 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 ARMC9Q7Z3E5 817 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 SYCE1Q8N0S2 351 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 GPD1LQ8N335 351 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 OLIG1Q8TAK6 271 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 PLEKHO2Q8TD55 490 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 GTF3C2Q8WUA4 911 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 FAM167AQ96KS9 214 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 FAM81BQ96LP2 452 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 NRBP2Q9NSY0 501 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 ADGRA3Q8IWK6 1321 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 TMEM253P0C7T8 217 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 ATP4AP20648 1035 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 EPHX2P34913 555 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 MAP9Q49MG5 647 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 SLC39A4Q6P5W5 647 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 METTL7BQ6UX53 244 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 TRMT1LQ7Z2T5 733 aaKnown RBP11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 CBWD2Q8IUF1 395 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 LNX1Q8TBB1 728 aaPredicted RBP11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 COG1Q8WTW3 980 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 SLC7A3Q8WY07 619 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 POMGNT1Q8WZA1 660 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 KIFC3Q9BVG8 833 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 STYXL1Q9Y6J8 313 aa11.7□□□□□ -0.54
PHACTR4-204ENST00000493669 SIP14410 1827 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 HNRNPDLO14979 420 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 SEC31AO94979 1220 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 GPC3P51654 580 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 VSNL1P62760 191 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 CYP24A1Q07973 514 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 DLK2Q6UY11 383 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 EXOC8Q8IYI6 725 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 SPATA4Q8NEY3 305 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 U2AF1L4Q8WU68 220 aaKnown RBP11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 UBE2Q2Q8WVN8 375 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 CLMNQ96JQ2 1002 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 FUT8Q9BYC5 575 aa11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 UBE2TQ9NPD8 197 aaPredicted RBP11.69□□□□□ -0.54
PHACTR4-204ENST00000493669 GSTTP1A0A1W2PQM5 241 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms