RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 POLD4Q9HCU8 107 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 ERVK-5Q9HDB9 667 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 CD320Q9NPF0 282 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 PADI3Q9ULW8 664 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 RALGAPA2Q2PPJ7 1873 aa12.82□□□□□ -0.36
CTSA-209ENST00000493522 TDRD15B5MCY1 1934 aaKnown RBP12.82□□□□□ -0.36
CTSA-209ENST00000493522 PRR33A8MZF0 331 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 GPR182O15218 404 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 CSDE1O75534 798 aaKnown RBP12.81□□□□□ -0.36
CTSA-209ENST00000493522 ALADP13716 330 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 IL9P15248 144 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 FGFR4P22455 802 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 EIF4BP23588 611 aaKnown RBP12.81□□□□□ -0.36
CTSA-209ENST00000493522 PPP2R5AQ15172 486 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 C1orf186Q6ZWK4 172 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 CATSPER4Q7RTX7 472 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 BSNDQ8WZ55 320 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 TOP1MTQ969P6 601 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 DHX58Q96C10 678 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 IFT74Q96LB3 600 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 DRC1Q96MC2 740 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 TIPINQ9BVW5 301 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 INO80BQ9C086 356 aaPredicted RBP12.81□□□□□ -0.36
CTSA-209ENST00000493522 KCND2Q9NZV8 630 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 ST3GAL5Q9UNP4 418 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 FAM50BQ9Y247 325 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 MUC6Q6W4X9 2439 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 WDFY4Q6ZS81 3184 aa12.81□□□□□ -0.36
CTSA-209ENST00000493522 COL4A6Q14031 1691 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 CITO14578 2027 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 NPHP3-ACAD11A0A0J9YXS1 232 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 GRXCR2A6NFK2 248 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 H3BNC9 293 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 INO80B-WBP1J3KQ70 363 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 TBCAO75347 108 aaKnown RBP12.8□□□□□ -0.36
CTSA-209ENST00000493522 FAM13AO94988 1023 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 UPP2O95045 317 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 IBSPP21815 317 aaPredicted RBP12.8□□□□□ -0.36
CTSA-209ENST00000493522 GUCY2CP25092 1073 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 DMP1Q13316 513 aaPredicted RBP12.8□□□□□ -0.36
CTSA-209ENST00000493522 GPM6BQ13491 265 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 NAALADL2Q58DX5 795 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 ADALQ6DHV7 355 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 SRGAP1Q7Z6B7 1085 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 ZBTB8OSQ8IWT0 167 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 TMEM192Q8IY95 271 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 DEPTORQ8TB45 409 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 REEP2Q9BRK0 252 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 FTHL17Q9BXU8 183 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 IFT122Q9HBG6 1241 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 TRIP11Q15643 1979 aa12.8□□□□□ -0.36
CTSA-209ENST00000493522 PDCD11Q14690 1871 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 C5orf42Q9H799 3197 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 DENND3A2RUS2 1198 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 GOLGA6L4A6NEF3 574 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 H3BQ06 376 aaPredicted RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 POLR2DO15514 142 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 ERLIN2O94905 339 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 PFKFB1P16118 471 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 LIG1P18858 919 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 NAMPTP43490 491 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 PEX3P56589 373 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 PTENP60484 403 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 MAPK7Q13164 816 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 E2F4Q16254 413 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 CSPP1Q1MSJ5 1256 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 EP400NLQ6ZTU2 488 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 SV2BQ7L1I2 683 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 DAW1Q8N136 415 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 FSIP1Q8NA03 581 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 IQUBQ8NA54 791 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 LINC01599Q8WXQ3 324 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 MRPS27Q92552 414 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 PABPC5Q96DU9 382 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 PYM1Q9BRP8 204 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 KIFC3Q9BVG8 833 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 TMX1Q9H3N1 280 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 ZHX3Q9H4I2 956 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 NSUN3Q9H649 340 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 MINDY3Q9H8M7 445 aa12.79□□□□□ -0.36
CTSA-209ENST00000493522 PIN4Q9Y237 131 aaKnown RBP12.79□□□□□ -0.36
CTSA-209ENST00000493522 A0A1B0GVL5 298 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 LOC101059915A0A1B0GWI6 518 aaPredicted RBP12.78□□□□□ -0.36
CTSA-209ENST00000493522 A0A1W2PQ27 194 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 A0A1W2PQ64 194 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 A0A1W2PQD8 194 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 CCDC169A6NNP5 214 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 NCK2O43639 380 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 ZSCAN20P17040 1043 aaPredicted RBP12.78□□□□□ -0.36
CTSA-209ENST00000493522 CMA1P23946 247 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 MBTD1Q05BQ5 628 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 ARSHQ5FYA8 562 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 TCEAL5Q5H9L2 206 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 CDCA2Q69YH5 1023 aaPredicted RBP12.78□□□□□ -0.36
CTSA-209ENST00000493522 DYMQ7RTS9 669 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 IFNLR1Q8IU57 520 aaPredicted RBP12.78□□□□□ -0.36
CTSA-209ENST00000493522 STAMQ92783 540 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 ADAM2Q99965 735 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 C2orf40Q9H1Z8 148 aa12.78□□□□□ -0.36
CTSA-209ENST00000493522 CUEDC2Q9H467 287 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms