RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 FHOD3Q2V2M9 1422 aa4.72□□□□□ -1.65
PTCD3-218ENST00000493430 A0A0A6YYJ9 748 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 KLRG2A4D1S0 409 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-218ENST00000493430 CBX4O00257 560 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 FOXN1O15353 648 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 FAM20BO75063 409 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 JMJD7P0C870 316 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 SPIDRQ14159 915 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 KRTAP15-1Q3LI76 137 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 CFAP100Q494V2 611 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 CDCA2Q69YH5 1023 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-218ENST00000493430 LAIR1Q6GTX8 287 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 HTR3DQ70Z44 454 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 KANSL1Q7Z3B3 1105 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 ZNF575Q86XF7 245 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 C7orf31Q8N865 590 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 SLC25A43Q8WUT9 341 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-218ENST00000493430 AGAP2Q99490 1192 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 PITHD1Q9GZP4 211 aaPredicted RBP4.71□□□□□ -1.66
PTCD3-218ENST00000493430 MTG2Q9H4K7 406 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 SPO11Q9Y5K1 396 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 ABCA9Q8IUA7 1624 aa4.71□□□□□ -1.66
PTCD3-218ENST00000493430 GLI2P10070 1586 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 MTSS1O43312 755 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 PRPF6O94906 941 aaKnown RBP4.7□□□□□ -1.66
PTCD3-218ENST00000493430 FSBPO95073 299 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 KRT4P19013 534 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 GNAT2P19087 354 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 SQSTM1Q13501 440 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 KIAA1841Q6NSI8 718 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 PCSK4Q6UW60 755 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 Q6ZPA2 131 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 MRGPREQ86SM8 312 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 ZZZ3Q8IYH5 903 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 ZNF276Q8N554 614 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 MB21D1Q8N884 522 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 MDGA1Q8NFP4 955 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 ST8SIA2Q92186 375 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 PGBD4Q96DM1 585 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 UIMC1Q96RL1 719 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 CRAMP1Q96RY5 1269 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 DNAJC2Q99543 621 aaKnown RBP4.7□□□□□ -1.66
PTCD3-218ENST00000493430 MYL10Q9BUA6 226 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 TOMM22Q9NS69 142 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 TRPS1Q9UHF7 1281 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 ZKSCAN5Q9Y2L8 839 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 EPRSP07814 1512 aaKnown RBP4.7□□□□□ -1.66
PTCD3-218ENST00000493430 FER1L4A9Z1Z3 1794 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 PTPRGP23470 1445 aa4.7□□□□□ -1.66
PTCD3-218ENST00000493430 KDM5BQ9UGL1 1544 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 PPP1R12AO14974 1030 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-218ENST00000493430 OPHN1O60890 802 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 RFPL3O75679 317 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 SDSP20132 328 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 NAIF1Q69YI7 327 aaPredicted RBP4.69□□□□□ -1.66
PTCD3-218ENST00000493430 ESRP1Q6NXG1 681 aaKnown RBP4.69□□□□□ -1.66
PTCD3-218ENST00000493430 UNQ6494/PRO21346Q6UXR6 183 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 RPUSD2Q8IZ73 545 aaKnown RBP4.69□□□□□ -1.66
PTCD3-218ENST00000493430 SYNE4Q8N205 404 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 RTF1Q92541 710 aaKnown RBP4.69□□□□□ -1.66
PTCD3-218ENST00000493430 LENG9Q96B70 501 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 HIST1H2AHQ96KK5 128 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 HIST1H2AJQ99878 128 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 NOL10Q9BSC4 688 aaKnown RBP4.69□□□□□ -1.66
PTCD3-218ENST00000493430 POFUT1Q9H488 388 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 IFT57Q9NWB7 429 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 OXSMQ9NWU1 459 aa4.69□□□□□ -1.66
PTCD3-218ENST00000493430 MADDQ8WXG6 1647 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 CFAP65Q6ZU64 1925 aaKnown RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 TNIKQ9UKE5 1360 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 ITSN2Q9NZM3 1697 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 A0A0A6YYK5 440 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 PPFIA4O75335 1185 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 FSTL1Q12841 308 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 BMS1Q14692 1282 aaKnown RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 DCAF17Q5H9S7 520 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 C1QL3Q5VWW1 255 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 APBB1IPQ7Z5R6 666 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 MRFAP1L1Q96HT8 127 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 SOX7Q9BT81 388 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 INTS7Q9NVH2 962 aaKnown RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 MAGEC2Q9UBF1 373 aaPredicted RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 UACAQ9BZF9 1416 aa4.68□□□□□ -1.66
PTCD3-218ENST00000493430 NUP153P49790 1475 aaKnown RBP4.68□□□□□ -1.66
PTCD3-218ENST00000493430 MAGI3Q5TCQ9 1506 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 SUPT6HQ7KZ85 1726 aaKnown RBP4.67□□□□□ -1.66
PTCD3-218ENST00000493430 NRP1O14786 923 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 HOXA3O43365 443 aaPredicted RBP4.67□□□□□ -1.66
PTCD3-218ENST00000493430 RECQL4O94761 1208 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 RHOBTB3O94955 611 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 GCP02774 474 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 GAAP10253 952 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 ATP2A2P16615 1042 aaKnown RBP4.67□□□□□ -1.66
PTCD3-218ENST00000493430 CD40P25942 277 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 PABPC4Q13310 644 aaKnown RBP eCLIP4.67□□□□□ -1.66
PTCD3-218ENST00000493430 LY6G5CQ5SRR4 150 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 CREB3L3Q68CJ9 461 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 KIF18BQ86Y91 864 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 PASD1Q8IV76 773 aa4.67□□□□□ -1.66
PTCD3-218ENST00000493430 SH3TC2Q8TF17 1288 aa4.67□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms