RNA–Protein interactions for RNA: ENST00000493217.1

TSC22D4-205, Transcript of TSC22 domain family member 4, humanhuman

TSL 1 (best)

Gene TSC22D4, Length 2,060 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC22D4-205ENST00000493217 GOLGA6CA6NDK9 693 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 CCDC188H7C350 402 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 MAFGO15525 162 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 SART1O43290 800 aaKnown RBP20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 NR3C2P08235 984 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 GOLGA6DP0CG33 693 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 GMPSP49915 693 aaPredicted RBP20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 LEKR1Q6ZMV7 388 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 SCYL3Q8IZE3 742 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 IQCKQ8N0W5 287 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 GPRASP2Q96D09 838 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 ISCUQ9H1K1 167 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 GOLGA6AQ9NYA3 693 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 ZNF112Q9UJU3 913 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 TBX20Q9UMR3 447 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 PCDHA10Q9Y5I2 948 aa20.44■□□□□ 0.86
TSC22D4-205ENST00000493217 BHMG1C9JSJ3 638 aaPredicted RBP20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 OPA1O60313 960 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 HSF2BPO75031 334 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 ADRB2P07550 413 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 CCND2P30279 289 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 NPTX2P47972 431 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 MXI1P50539 228 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 SF3B2Q13435 895 aaKnown RBP20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 NLRX1Q86UT6 975 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 MAP4K3Q8IVH8 894 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 ZNF280CQ8ND82 737 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 WHAMMQ8TF30 809 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 SLC20A1Q8WUM9 679 aa20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 CNOT7Q9UIV1 285 aaKnown RBP20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 TTC7AQ9ULT0 858 aaPredicted RBP20.43■□□□□ 0.86
TSC22D4-205ENST00000493217 GOLGA8KD6RF30 607 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 KRIT1O00522 736 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 SMTNP53814 917 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 ERVK-9P63128 1117 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 DCAF15Q66K64 600 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 FAM76AQ8TAV0 307 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 ZKSCAN4Q969J2 545 aaPredicted RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 ZIM3Q96PE6 472 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 NTPCRQ9BSD7 190 aaKnown RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 TAF1DQ9H5J8 278 aaPredicted RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 SEPT11Q9NVA2 429 aaKnown RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 EXOC7Q9UPT5 735 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 UTRNP46939 3433 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 DOCK1Q14185 1865 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 CCDC169A6NNP5 214 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 ANKRD63C9JTQ0 380 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 DDX3YO15523 660 aaKnown RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 PTPRAP18433 802 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 CNGA1P29973 690 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 HADHBP55084 474 aaKnown RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 PPFIA1Q13136 1202 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 SNRNP35Q16560 246 aaKnown RBP20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 CBWD2Q8IUF1 395 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 HVCN1Q96D96 273 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 ADAMTS5Q9UNA0 930 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 COG5Q9UP83 839 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 RLFQ13129 1914 aa20.42■□□□□ 0.86
TSC22D4-205ENST00000493217 GOLGA8IPA6NC78 632 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 GOLGA8JA6NMD2 632 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 ZNF862O60290 1169 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 OAZ1P54368 228 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 DMP1Q13316 513 aaPredicted RBP20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 RHOT2Q8IXI1 618 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 KIFC3Q9BVG8 833 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 DDX47Q9H0S4 455 aaKnown RBP20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 AS3MTQ9HBK9 375 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 ZNF214Q9UL59 606 aaPredicted RBP20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 DIS3Q9Y2L1 958 aaKnown RBP20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 BRCA1P38398 1863 aaKnown RBP20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 RGS20O76081 388 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 ITGA4P13612 1032 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 KCNA2P16389 499 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 ECHS1P30084 290 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 SNRNP48Q6IEG0 339 aaKnown RBP20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 OTUD6AQ7L8S5 288 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 PARD3BQ8TEW8 1205 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 PIK3R5Q8WYR1 880 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 KAT5Q92993 513 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 C12orf42Q96LP6 360 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 RUFY1Q96T51 708 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 C17orf75Q9HAS0 396 aa20.41■□□□□ 0.86
TSC22D4-205ENST00000493217 DENND3A2RUS2 1198 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 STBD1O95210 358 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 DSG3P32926 999 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 GUCY2FP51841 1108 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 CUL1Q13616 776 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 TCEAL1Q15170 157 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 DCAF12L1Q5VU92 463 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 FAM71AQ8IYT1 594 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 SPIRE2Q8WWL2 714 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 WRNIP1Q96S55 665 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 GABBR1Q9UBS5 961 aa20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 COL11A1P12107 1806 aaPredicted RBP20.4■□□□□ 0.86
TSC22D4-205ENST00000493217 SHOX2O60902 331 aaPredicted RBP20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 ZBTB7AO95365 584 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 FTLP02792 175 aaPredicted RBP20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 TTMPQ5BVD1 217 aa20.39■□□□□ 0.86
TSC22D4-205ENST00000493217 LRRC31Q6UY01 552 aa20.39■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms