RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 A0A1W2PQ27 194 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 A0A1W2PQ64 194 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 A0A1W2PQD8 194 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 H0YCG3 227 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 ACKR2O00590 384 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 TRAK2O60296 914 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 EOMESO95936 686 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 PFKFB1P16118 471 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 TAP1Q03518 808 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 STRN3Q13033 797 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 BTG3Q14201 252 aaPredicted RBP15.39■□□□□ 0.05
CCM2-217ENST00000492883 PAN2Q504Q3 1202 aaKnown RBP15.39■□□□□ 0.05
CCM2-217ENST00000492883 Q7L0L9 218 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 CEP57L1Q8IYX8 460 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 ABI1Q8IZP0 508 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 FIBCD1Q8N539 461 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 DEFB123Q8N688 67 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 PGBD4Q96DM1 585 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 CCDC51Q96ER9 411 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 IPO9Q96P70 1041 aaKnown RBP15.39■□□□□ 0.05
CCM2-217ENST00000492883 TRIM6Q9C030 488 aaPredicted RBP15.39■□□□□ 0.05
CCM2-217ENST00000492883 CCDC113Q9H0I3 377 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 TNMDQ9H2S6 317 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 PCDHB2Q9Y5E7 798 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 PHLPP2Q6ZVD8 1323 aa15.39■□□□□ 0.05
CCM2-217ENST00000492883 A0A1B0GUA9 196 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 TBKBP1A7MCY6 615 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 HOXA2O43364 376 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 ZNF623O75123 536 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 FGFR1P11362 822 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 IDEP14735 1019 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 SYKP43405 635 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 GATMP50440 423 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 ZNF131P52739 623 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 CSPP1Q1MSJ5 1256 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 LONRF3Q496Y0 759 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 CDR2LQ86X02 465 aaPredicted RBP15.38■□□□□ 0.05
CCM2-217ENST00000492883 FAM178BQ8IXR5 827 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 FSIP1Q8NA03 581 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 CNNM3Q8NE01 707 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 ZNF689Q96CS4 500 aaPredicted RBP15.38■□□□□ 0.05
CCM2-217ENST00000492883 TTYH1Q9H313 450 aaPredicted RBP15.38■□□□□ 0.05
CCM2-217ENST00000492883 CERS4Q9HA82 394 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 MAGEF1Q9HAY2 307 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 ARHGAP28Q9P2N2 729 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 USP20Q9Y2K6 914 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 TET1Q8NFU7 2136 aa15.38■□□□□ 0.05
CCM2-217ENST00000492883 CEP290O15078 2479 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.37■□□□□ 0.05
CCM2-217ENST00000492883 LINC01553A4QN01 128 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 N4BP3O15049 544 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 ARHGEF15O94989 841 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 UBXN11Q5T124 520 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 ATF7IP2Q5U623 682 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 SLC27A1Q6PCB7 646 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 HAUS6Q7Z4H7 955 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 ZNF598Q86UK7 904 aaKnown RBP15.37■□□□□ 0.05
CCM2-217ENST00000492883 CMTR2Q8IYT2 770 aaKnown RBP15.37■□□□□ 0.05
CCM2-217ENST00000492883 TMEM161BQ8NDZ6 487 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 SP7Q8TDD2 431 aaPredicted RBP15.37■□□□□ 0.05
CCM2-217ENST00000492883 MRPS27Q92552 414 aaKnown RBP15.37■□□□□ 0.05
CCM2-217ENST00000492883 LPPQ93052 612 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 ADPGKQ9BRR6 497 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 EIF2AQ9BY44 585 aaKnown RBP15.37■□□□□ 0.05
CCM2-217ENST00000492883 TMEM117Q9H0C3 514 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 KBTBD4Q9NVX7 518 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 USP25Q9UHP3 1055 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 SERTAD1Q9UHV2 236 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 CNTNAP2Q9UHC6 1331 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 WDR81Q562E7 1941 aa15.37■□□□□ 0.05
CCM2-217ENST00000492883 EVPLQ92817 2033 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 TTLL13PA6NNM8 815 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 K7ENM7 598 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 NPTXRO95502 500 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 SLFN14P0C7P3 912 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 MAPTP10636 758 aaKnown RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 ITGA4P13612 1032 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 ATF7P17544 494 aaPredicted RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 GAP43P17677 238 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 SCP2P22307 547 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 AFMP43652 599 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 NDUFA8P51970 172 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 NCKAP1LP55160 1127 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 GRIN2CQ14957 1233 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 HERC4Q5GLZ8 1057 aaPredicted RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 NT5DC1Q5TFE4 455 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 APBB1IPQ7Z5R6 666 aaPredicted RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 MRPL10Q7Z7H8 261 aaKnown RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 SFR1Q86XK3 245 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 CCDC65Q8IXS2 484 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 HACE1Q8IYU2 909 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 SLC17A8Q8NDX2 589 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 ARNTL2Q8WYA1 636 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 DNAJC19Q96DA6 116 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 TGS1Q96RS0 853 aaKnown RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 MRPL4Q9BYD3 311 aaKnown RBP15.36■□□□□ 0.05
CCM2-217ENST00000492883 PANK4Q9NVE7 773 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 MTUS1Q9ULD2 1270 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 HPSEQ9Y251 543 aa15.36■□□□□ 0.05
CCM2-217ENST00000492883 IPPQ9Y573 584 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms