RNA–Protein interactions for RNA: ENST00000491825.1

CDC42SE1-205, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-205ENST00000491825 DDX11L8A8MPP1 907 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 CUTAO60888 179 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 LAG3P18627 525 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 RFC5P40937 340 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 UBA7P41226 1012 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 RARRES1P49788 294 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 TBC1D8BQ0IIM8 1120 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 CSPP1Q1MSJ5 1256 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 TMEM119Q4V9L6 283 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 PLA2G4FQ68DD2 849 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 RBM23Q86U06 439 aaKnown RBP16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 ZNF598Q86UK7 904 aaKnown RBP16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 CABP7Q86V35 215 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 ECHDC2Q86YB7 292 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 EXOC8Q8IYI6 725 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 SPATA32Q96LK8 384 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 CLIC6Q96NY7 704 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 POP1Q99575 1024 aaKnown RBP16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 JPH2Q9BR39 696 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 BARX2Q9UMQ3 279 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 KIAA1024Q9UPX6 916 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 LZTS1Q9Y250 596 aa16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 FNDC1Q4ZHG4 1894 aaPredicted RBP16.67■□□□□ 0.26
CDC42SE1-205ENST00000491825 HOXA2O43364 376 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 GAS2O43903 313 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 ATF7P17544 494 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 NCLP19338 710 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 TXLNAP40222 546 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 RBM10P98175 930 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 PLCB3Q01970 1234 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 MTERF2Q49AM1 385 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 CLLU1OSQ5K130 101 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 AXDND1Q5T1B0 1012 aaPredicted RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 SPOUT1Q5T280 376 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 THNSL1Q8IYQ7 743 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 LRRC43Q8N309 656 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 CALML4Q96GE6 196 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 CHAMP1Q96JM3 812 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 CEP170P1Q96L14 293 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 PNMA5Q96PV4 448 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 DHX33Q9H6R0 707 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 PLXNA4Q9HCM2 1894 aa16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 DDX19AQ9NUU7 478 aaKnown RBP16.66■□□□□ 0.26
CDC42SE1-205ENST00000491825 A0A0U1RQF3 1178 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 PER2O15055 1255 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 ZBTB39O15060 712 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 MAFO75444 373 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 DGAT1O75907 488 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 ZSCAN20P17040 1043 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 FGFR4P22455 802 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 ME1P48163 572 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 NPEPPSP55786 919 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 KCNC3Q14003 757 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 DUSP6Q16828 381 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 XKR9Q5GH70 373 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 HERC4Q5GLZ8 1057 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 PIGOQ8TEQ8 1089 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 SLC7A3Q8WY07 619 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 MRPS27Q92552 414 aaKnown RBP16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 EPSTI1Q96J88 318 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 CDK5RAP3Q96JB5 506 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 CCDC43Q96MW1 224 aaKnown RBP16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 TLE6Q9H808 572 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 PCDHA7Q9UN72 937 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 USP15Q9Y4E8 981 aaPredicted RBP16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 EVPLQ92817 2033 aa16.65■□□□□ 0.26
CDC42SE1-205ENST00000491825 CSDE1O75534 798 aaKnown RBP16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 HOXD11P31277 338 aaPredicted RBP16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 PBX3P40426 434 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 POLGP54098 1239 aaPredicted RBP16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 PDE12Q6L8Q7 609 aaKnown RBP16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 SHC4Q6S5L8 630 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 KCNT2Q6UVM3 1135 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 USP49Q70CQ1 688 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 RNF135Q8IUD6 432 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 MICAL1Q8TDZ2 1067 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 NLRP7Q8WX94 980 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 SUSD6Q92537 303 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 CDCA3Q99618 268 aaPredicted RBP16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 SH2D3AQ9BRG2 576 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 TRAIPQ9BWF2 469 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 MUTYHQ9UIF7 546 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 DNM3Q9UQ16 869 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 TRIOO75962 3097 aa16.64■□□□□ 0.25
CDC42SE1-205ENST00000491825 FSD2A1L4K1 749 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 LOC730098B7Z3J9 87 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 EOMESO95936 686 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 PLCG1P19174 1290 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 PPM1AP35813 382 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 CBX2Q14781 532 aaPredicted RBP16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 EMC2Q15006 297 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 KARSQ15046 597 aaKnown RBP16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 SPECC1Q5M775 1068 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 RESP18Q5W5W9 173 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 ADALQ6DHV7 355 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 TMEM184AQ6ZMB5 413 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 KCNK18Q7Z418 384 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 ZNF558Q96NG5 402 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 SCLT1Q96NL6 688 aa16.63■□□□□ 0.25
CDC42SE1-205ENST00000491825 BHMT2Q9H2M3 363 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms