RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 USO1O60763 962 aaKnown RBP20.01■□□□□ 0.79
HMGN1-219ENST00000491183 GALTP07902 379 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 RPA1P27694 616 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 TRAPPC10P48553 1259 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 MBTD1Q05BQ5 628 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 GNL2Q13823 731 aaKnown RBP20.01■□□□□ 0.79
HMGN1-219ENST00000491183 TFDP1Q14186 410 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 AMHR2Q16671 573 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 MAEAQ7L5Y9 396 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 TMC7Q7Z402 723 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 ZNF280BQ86YH2 543 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 SMRP1Q8NCR6 262 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 SMG8Q8ND04 991 aaKnown RBP20.01■□□□□ 0.79
HMGN1-219ENST00000491183 NACC1Q96RE7 527 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 POLR3FQ9H1D9 316 aaPredicted RBP20.01■□□□□ 0.79
HMGN1-219ENST00000491183 GPRC5CQ9NQ84 441 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 DNAJB4Q9UDY4 337 aa20.01■□□□□ 0.79
HMGN1-219ENST00000491183 DBR1Q9UK59 544 aaKnown RBP20.01■□□□□ 0.79
HMGN1-219ENST00000491183 INO80B-WBP1J3KQ70 363 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 ZC3H11AO75152 810 aaKnown RBP eCLIP20■□□□□ 0.79
HMGN1-219ENST00000491183 DDHD2O94830 711 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 ERLIN2O94905 339 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 CD2BP2O95400 341 aaKnown RBP20■□□□□ 0.79
HMGN1-219ENST00000491183 NCLP19338 710 aaKnown RBP20■□□□□ 0.79
HMGN1-219ENST00000491183 COL9A1P20849 921 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 AXLP30530 894 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 PCBP1Q15365 356 aaKnown RBP eCLIP20■□□□□ 0.79
HMGN1-219ENST00000491183 POTEGQ6S5H5 508 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 TMEM184AQ6ZMB5 413 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 MRPL43Q8N983 215 aaKnown RBP20■□□□□ 0.79
HMGN1-219ENST00000491183 BCL7CQ8WUZ0 217 aaPredicted RBP20■□□□□ 0.79
HMGN1-219ENST00000491183 CPB2Q96IY4 423 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 CCDC43Q96MW1 224 aaKnown RBP20■□□□□ 0.79
HMGN1-219ENST00000491183 EIF2AQ9BY44 585 aaKnown RBP20■□□□□ 0.79
HMGN1-219ENST00000491183 NFKBIZQ9BYH8 718 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 RNF39Q9H2S5 420 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 C11orf16Q9NQ32 467 aa20■□□□□ 0.79
HMGN1-219ENST00000491183 C5orf42Q9H799 3197 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 ECM1Q16610 540 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 TMEM169Q96HH4 297 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 TMX3Q96JJ7 454 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 GBP3Q9H0R5 595 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 RSAD1Q9HA92 442 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 RAPGEFL1Q9UHV5 662 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 NOL7Q9UMY1 257 aaKnown RBP19.99■□□□□ 0.79
HMGN1-219ENST00000491183 IPPQ9Y573 584 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 PCDHB6Q9Y5E3 794 aa19.99■□□□□ 0.79
HMGN1-219ENST00000491183 C2orf71A6NGG8 1288 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 B4GALT5O43286 388 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 ST18O60284 1047 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 ARF4P18085 180 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-219ENST00000491183 SLC11A1P49279 550 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 FXR2P51116 673 aaKnown RBP eCLIP19.98■□□□□ 0.79
HMGN1-219ENST00000491183 RNASELQ05823 741 aaKnown RBP19.98■□□□□ 0.79
HMGN1-219ENST00000491183 SMC1AQ14683 1233 aaKnown RBP19.98■□□□□ 0.79
HMGN1-219ENST00000491183 CNNM3Q8NE01 707 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 IGSF21Q96ID5 467 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 LRFN3Q9BTN0 628 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 CSRNP2Q9H175 543 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 USP15Q9Y4E8 981 aaPredicted RBP19.98■□□□□ 0.79
HMGN1-219ENST00000491183 HES2Q9Y543 173 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 CNTNAP2Q9UHC6 1331 aa19.98■□□□□ 0.79
HMGN1-219ENST00000491183 FSD2A1L4K1 749 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 GPR37L1O60883 481 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 CXCL14O95715 111 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 POMCP01189 267 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 ITGA4P13612 1032 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 PTGDRQ13258 359 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 LLGL2Q6P1M3 1020 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 NOTUMQ6P988 496 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 DDX53Q86TM3 631 aaKnown RBP19.97■□□□□ 0.79
HMGN1-219ENST00000491183 VPS52Q8N1B4 723 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 ERMNQ8TAM6 284 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 URGCPQ8TCY9 931 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 CCDC51Q96ER9 411 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 VN1R3Q9BXE9 311 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 ZBP1Q9H171 429 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 S1PR5Q9H228 398 aa19.97■□□□□ 0.79
HMGN1-219ENST00000491183 CYP11B2P19099 503 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 MUTP22033 750 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 NCBP1Q09161 790 aaKnown RBP19.96■□□□□ 0.79
HMGN1-219ENST00000491183 IL17AQ16552 155 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 TMEM31Q5JXX7 168 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 ANKRD54Q6NXT1 300 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 SYCE2Q6PIF2 218 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 PADI6Q6TGC4 694 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 CDR2LQ86X02 465 aaPredicted RBP19.96■□□□□ 0.79
HMGN1-219ENST00000491183 MCPH1Q8NEM0 835 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 AUTS2Q8WXX7 1259 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 BSNDQ8WZ55 320 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 SUSD6Q92537 303 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 MIOSQ9NXC5 875 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 KANSL3Q9P2N6 904 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 LRWD1Q9UFC0 647 aa19.96■□□□□ 0.79
HMGN1-219ENST00000491183 ARHGEF35A5YM69 484 aa19.95■□□□□ 0.78
HMGN1-219ENST00000491183 CARNS1A5YM72 827 aa19.95■□□□□ 0.78
HMGN1-219ENST00000491183 FAM86C2PA6NEL3 165 aa19.95■□□□□ 0.78
HMGN1-219ENST00000491183 LRRIQ4A6NIV6 560 aa19.95■□□□□ 0.78
HMGN1-219ENST00000491183 INPPL1O15357 1258 aa19.95■□□□□ 0.78
HMGN1-219ENST00000491183 CLASP2O75122 1294 aaKnown RBP19.95■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms