RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 PHKBQ93100 1093 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 CCDC136Q96JN2 1154 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 B3GALT6Q96L58 329 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 YTHDC1Q96MU7 727 aaKnown RBP17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 HERC2P3Q9BVR0 1158 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 TEKT3Q9BXF9 490 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 RSAD1Q9HA92 442 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 WDR6Q9NNW5 1121 aaKnown RBP17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 BMP2KQ9NSY1 1161 aaPredicted RBP17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 AGPAT5Q9NUQ2 364 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 EPS15L1Q9UBC2 864 aa17.22■□□□□ 0.35
SCAMP3-208ENST00000490999 IGKV6-21A0A0C4DH24 114 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 NRP1O14786 923 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 STBD1O95210 358 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 GLUD1P00367 558 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 SOD2P04179 222 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 SKIP12755 728 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 MIER3Q7Z3K6 550 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 ZNF410Q86VK4 478 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 RASEFQ8IZ41 740 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 CMASQ8NFW8 434 aaPredicted RBP17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 RSPH1Q8WYR4 309 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 STAMQ92783 540 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 SLC5A5Q92911 643 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 ZNF707Q96C28 371 aaPredicted RBP17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 FAM193BQ96PV7 902 aaPredicted RBP17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 RPS6KC1Q96S38 1066 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 DLGAP2Q9P1A6 1054 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 FAN1Q9Y2M0 1017 aa17.21■□□□□ 0.35
SCAMP3-208ENST00000490999 SPTBN2O15020 2390 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 CARNS1A5YM72 827 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 ZNF623O75123 536 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 KRT37O76014 449 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 ADH1AP07327 375 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 CPA1P15085 419 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 GLULP15104 373 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 SFNP31947 248 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 GLUD2P49448 558 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 DNM2P50570 870 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 PUM1Q14671 1186 aaKnown RBP eCLIP17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 XKR3Q5GH77 459 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 DHX32Q7L7V1 743 aaKnown RBP17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 GLYCTKQ8IVS8 523 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 CCDC12Q8WUD4 166 aaPredicted RBP17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 PGBD4Q96DM1 585 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 RIT2Q99578 217 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 NIFKQ9BYG3 293 aaKnown RBP17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 SEMA4AQ9H3S1 761 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 NUMBLQ9Y6R0 609 aa17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 KMT2BQ9UMN6 2715 aaPredicted RBP17.2■□□□□ 0.34
SCAMP3-208ENST00000490999 TDP2O95551 362 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 OR1G1P47890 313 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 HTR4Q13639 388 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 NONOQ15233 471 aaKnown RBP eCLIP17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 UBXN11Q5T124 520 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 ZC3H14Q6PJT7 736 aaKnown RBP17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 C1orf210Q8IVY1 113 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 RUBCNQ92622 972 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 CNTNAP3BQ96NU0 1288 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 TMEM175Q9BSA9 504 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 CNTNAP3Q9BZ76 1288 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 MINDY3Q9H8M7 445 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 IFT122Q9HBG6 1241 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 VPS54Q9P1Q0 977 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 SIT1Q9Y3P8 196 aa17.19■□□□□ 0.34
SCAMP3-208ENST00000490999 ACACBO00763 2458 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 DDX11L8A8MPP1 907 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 MAFO75444 373 aaPredicted RBP17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 PSMD10O75832 226 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 GNA11P29992 359 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 MLH1P40692 756 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 RSPO4Q2I0M5 234 aaPredicted RBP17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 RNF20Q5VTR2 975 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 DCLRE1AQ6PJP8 1040 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 ANO5Q75V66 913 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 PALB2Q86YC2 1186 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 PJA1Q8NG27 643 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 INO80BQ9C086 356 aaPredicted RBP17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 PIDD1Q9HB75 910 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 COL4A3BPQ9Y5P4 624 aa17.18■□□□□ 0.34
SCAMP3-208ENST00000490999 WDR81Q562E7 1941 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 TPRP12270 2363 aaKnown RBP17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 ALDH2P05091 517 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 NPEPPSP55786 919 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 IRX6P78412 446 aaPredicted RBP17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 FGD1P98174 961 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 CDC42EP1Q00587 391 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 MAML2Q8IZL2 1156 aaPredicted RBP17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 ZNF579Q8NAF0 562 aaKnown RBP17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 TMEM143Q96AN5 459 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 RPP25Q9BUL9 199 aaKnown RBP17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 RNF39Q9H2S5 420 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 DLL3Q9NYJ7 618 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 STK39Q9UEW8 545 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 HES2Q9Y543 173 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 CNTNAP2Q9UHC6 1331 aa17.17■□□□□ 0.34
SCAMP3-208ENST00000490999 TGM5O43548 720 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 SRGAP2CP0DJJ0 459 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 LAMP2P13473 410 aa17.16■□□□□ 0.34
SCAMP3-208ENST00000490999 RPL17P18621 184 aaKnown RBP17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms