RNA–Protein interactions for RNA: ENST00000490909.1

PCOLCE-209, Transcript of procollagen C-endopeptidase enhancer, humanhuman

TSL 2

Gene PCOLCE, Length 318 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCOLCE-209ENST00000490909 CES5AQ6NT32 575 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 TMC5Q6UXY8 1006 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 AGMOQ6ZNB7 445 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 DDX53Q86TM3 631 aaKnown RBP9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 ZNF410Q86VK4 478 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 RHPN2Q8IUC4 686 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 UBALD2Q8IYN6 164 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 RNF168Q8IYW5 571 aaPredicted RBP9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 ZDHHC14Q8IZN3 488 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 DAGLBQ8NCG7 672 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 RDM1Q8NG50 284 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 BICD2Q8TD16 824 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 GCOM2Q9BZD3 368 aaPredicted RBP9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 GBP3Q9H0R5 595 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 NRBP2Q9NSY0 501 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 DZANK1Q9NVP4 752 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 TPCN1Q9ULQ1 816 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 PCDHA4Q9UN74 947 aa9.46□□□□□ -0.9
PCOLCE-209ENST00000490909 CXCL14O95715 111 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 EFEMP2O95967 443 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 SSBP05455 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 NPR3P17342 541 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 CLCN4P51793 760 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 POLGP54098 1239 aaPredicted RBP9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 NPEPPSP55786 919 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 AKAP17AQ02040 695 aaKnown RBP9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 ME3Q16798 604 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 MOXD1Q6UVY6 613 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 GLB1LQ6UWU2 654 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 TRIM22Q8IYM9 498 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 ZNF710Q8N1W2 664 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 WASF1Q92558 559 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 ATOH1Q92858 354 aaPredicted RBP9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 SFXN1Q9H9B4 322 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 KCNMB3Q9NPA1 279 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 SH3GLB2Q9NR46 395 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 CHST12Q9NRB3 414 aa9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 SUCLA2Q9P2R7 463 aaPredicted RBP9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 DBR1Q9UK59 544 aaKnown RBP9.45□□□□□ -0.9
PCOLCE-209ENST00000490909 TRIP11Q15643 1979 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 NOTCH4Q99466 2003 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 FAM205CA6NFA0 338 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 K7ELQ4 463 aaPredicted RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 NARSO43776 548 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 LILRB3O75022 631 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 ZNF623O75123 536 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 CNPP09543 421 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 PDIA4P13667 645 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 HOXA11P31270 313 aaPredicted RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 NBL1P41271 181 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 RAB27AP51159 221 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 NLRP5P59047 1200 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 HMGN5P82970 282 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 SSRP1Q08945 709 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 SPIRE1Q08AE8 756 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 SCRN1Q12765 414 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 PPP2R5CQ13362 524 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 INF2Q27J81 1249 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 CATSPER4Q7RTX7 472 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 GPR149Q86SP6 731 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 CABP7Q86V35 215 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 HSCBQ8IWL3 235 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 BLIDQ8IZY5 108 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 SMG8Q8ND04 991 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 TMEM143Q96AN5 459 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 KLHL5Q96PQ7 755 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 LARP6Q9BRS8 491 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 DHX33Q9H6R0 707 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 RSAD1Q9HA92 442 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 XPNPEP1Q9NQW7 623 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 CYP26B1Q9NR63 512 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 GJB4Q9NTQ9 266 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 LIMD1Q9UGP4 676 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 DDX25Q9UHL0 483 aaKnown RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 KCNJ14Q9UNX9 436 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 USTQ9Y2C2 406 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 KIF3AQ9Y496 699 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 PCDHB2Q9Y5E7 798 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 COL4A3BPQ9Y5P4 624 aa9.44□□□□□ -0.9
PCOLCE-209ENST00000490909 CACNA1IQ9P0X4 2223 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 COL4A2P08572 1712 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 STK36Q9NRP7 1315 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 INPPL1O15357 1258 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 PI15O43692 258 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 XBP1P17861 261 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 MLH1P40692 756 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 NUBP1P53384 320 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 PSMC5P62195 406 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 DSC1Q08554 894 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 BECN1Q14457 450 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 EMC2Q15006 297 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 NONOQ15233 471 aaKnown RBP eCLIP9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 EARS2Q5JPH6 523 aaKnown RBP9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 ASTLQ6HA08 431 aaPredicted RBP9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 POTEGQ6S5H5 508 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 CCDC149Q6ZUS6 474 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 TAS1R1Q7RTX1 841 aa9.43□□□□□ -0.9
PCOLCE-209ENST00000490909 FRMD5Q7Z6J6 570 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms