RNA–Protein interactions for RNA: ENST00000490831.1

COL27A1-206, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 3

Gene COL27A1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-206ENST00000490831 BSNDQ8WZ55 320 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 KIFAP3Q92845 792 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 PRIMPOLQ96LW4 560 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 AK8Q96MA6 479 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 ZNF558Q96NG5 402 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 CSRNP2Q9H175 543 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 FZD8Q9H461 694 aa16.85■□□□□ 0.29
COL27A1-206ENST00000490831 A0A1B0GUA9 196 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 LRRIQ4A6NIV6 560 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 FSCN2O14926 492 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 INPPL1O15357 1258 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 SLC26A4O43511 780 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 IRS1P35568 1242 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 KCNQ1P51787 676 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 HYAL1Q12794 435 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 NOMO2Q5JPE7 1267 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 PDE12Q6L8Q7 609 aaKnown RBP16.84■□□□□ 0.29
COL27A1-206ENST00000490831 KCNK18Q7Z418 384 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 MRPS27Q92552 414 aaKnown RBP16.84■□□□□ 0.29
COL27A1-206ENST00000490831 C2orf40Q9H1Z8 148 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 TBC1D13Q9NVG8 400 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 PRMT7Q9NVM4 692 aaPredicted RBP16.84■□□□□ 0.29
COL27A1-206ENST00000490831 NCOR1O75376 2440 aa16.84■□□□□ 0.29
COL27A1-206ENST00000490831 VPS37CA5D8V6 355 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-206ENST00000490831 VWA3AA6NCI4 1184 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 E9PMD0 336 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 RESTQ13127 1097 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 PPP2R5AQ15172 486 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 ZBTB8OSQ8IWT0 167 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 SLC39A11Q8N1S5 342 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 ADAMTS19Q8TE59 1207 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 PPP2R3CQ969Q6 453 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 CPB2Q96IY4 423 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 PNMA5Q96PV4 448 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 EIF2AQ9BY44 585 aaKnown RBP16.83■□□□□ 0.28
COL27A1-206ENST00000490831 CCDC113Q9H0I3 377 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 NT5C3AQ9H0P0 336 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 RSAD1Q9HA92 442 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 UBN1Q9NPG3 1134 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 TLR9Q9NR96 1032 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 SPG21Q9NZD8 308 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 DAXXQ9UER7 740 aaPredicted RBP16.83■□□□□ 0.28
COL27A1-206ENST00000490831 IPPQ9Y573 584 aa16.83■□□□□ 0.28
COL27A1-206ENST00000490831 ZMYM2Q9UBW7 1377 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 B4GALT5O43286 388 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 KCNA5P22460 613 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 LTBRP36941 435 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 PBX3P40426 434 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 BCAR1P56945 870 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 ERVFC1P60507 584 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 LONRF3Q496Y0 759 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 TMEM119Q4V9L6 283 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 RINT1Q6NUQ1 792 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 SLC27A1Q6PCB7 646 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 C1orf186Q6ZWK4 172 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 DAW1Q8N136 415 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 NRDE2Q9H7Z3 1164 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 KANSL3Q9P2N6 904 aa16.82■□□□□ 0.28
COL27A1-206ENST00000490831 PUF60Q9UHX1 559 aaKnown RBP16.82■□□□□ 0.28
COL27A1-206ENST00000490831 ACKR2O00590 384 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 ITGA4P13612 1032 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 GUCY2CP25092 1073 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 LONP1P36776 959 aaKnown RBP16.81■□□□□ 0.28
COL27A1-206ENST00000490831 ALDH7A1P49419 539 aaKnown RBP16.81■□□□□ 0.28
COL27A1-206ENST00000490831 EFNA5P52803 228 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 KRT17Q04695 432 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 MAPK7Q13164 816 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 ADAM15Q13444 863 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 SF3A1Q15459 793 aaKnown RBP16.81■□□□□ 0.28
COL27A1-206ENST00000490831 ADGRD2Q7Z7M1 963 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 SYT2Q8N9I0 419 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-206ENST00000490831 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-206ENST00000490831 URGCPQ8TCY9 931 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 IFT74Q96LB3 600 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 RUSC1Q9BVN2 902 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 TIPINQ9BVW5 301 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 RNF39Q9H2S5 420 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 MTMR6Q9Y217 621 aa16.81■□□□□ 0.28
COL27A1-206ENST00000490831 MORC2Q9Y6X9 1032 aaPredicted RBP16.81■□□□□ 0.28
COL27A1-206ENST00000490831 B4GALT3O60512 393 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 GALTP07902 379 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 GTF2F1P35269 517 aaKnown RBP eCLIP16.8■□□□□ 0.28
COL27A1-206ENST00000490831 AFF1P51825 1210 aaKnown RBP16.8■□□□□ 0.28
COL27A1-206ENST00000490831 PTPAQ15257 358 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 MAPK6Q16659 721 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 PUS10Q3MIT2 529 aaKnown RBP16.8■□□□□ 0.28
COL27A1-206ENST00000490831 CABP7Q86V35 215 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 EFHBQ8N7U6 833 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 DEPTORQ8TB45 409 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 DRC1Q96MC2 740 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 UHRF1Q96T88 793 aaPredicted RBP16.8■□□□□ 0.28
COL27A1-206ENST00000490831 C17orf75Q9HAS0 396 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 NGRNQ9NPE2 291 aaKnown RBP16.8■□□□□ 0.28
COL27A1-206ENST00000490831 CLDND1Q9NY35 253 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 KCND2Q9NZV8 630 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 INPP5FQ9Y2H2 1132 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 GIT1Q9Y2X7 761 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 PCDHGC5Q9Y5F6 944 aa16.8■□□□□ 0.28
COL27A1-206ENST00000490831 TCF20Q9UGU0 1960 aaKnown RBP16.79■□□□□ 0.28
COL27A1-206ENST00000490831 FSD2A1L4K1 749 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms