RNA–Protein interactions for RNA: ENST00000490653.1

PRPF4B-208, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 2

Gene PRPF4B, Length 581 nt, Biotype processed transcript, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-208ENST00000490653 DSC3Q14574 896 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 NONOQ15233 471 aaKnown RBP eCLIP8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 TARBP2Q15633 366 aaKnown RBP8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 TCEAL5Q5H9L2 206 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 CPLX2Q6PUV4 134 aaKnown RBP8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 PIK3AP1Q6ZUJ8 805 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 SMAP1Q8IYB5 467 aaPredicted RBP8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 GJD3Q8N144 294 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 BANK1Q8NDB2 785 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 NSUN7Q8NE18 718 aaKnown RBP8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 HAS1Q92839 578 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 FBXL18Q96ME1 805 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 CNTNAP3BQ96NU0 1288 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 RIT2Q99578 217 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 ADAM2Q99965 735 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 CNTNAP3Q9BZ76 1288 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 NRBP2Q9NSY0 501 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 RNF19AQ9NV58 838 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 LMCD1Q9NZU5 365 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 DDX25Q9UHL0 483 aaKnown RBP8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 HCN4Q9Y3Q4 1203 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 PCDHGC5Q9Y5F6 944 aa8.24□□□□□ -1.09
PRPF4B-208ENST00000490653 NLRC5Q86WI3 1866 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 COL1A2P08123 1366 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 PRR33A8MZF0 331 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 BTBD18B2RXH4 712 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 C9IYK1 514 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 H3BQ06 376 aaPredicted RBP8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 M0QZ92 97 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 CTNNB1P35222 781 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 IRS1P35568 1242 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 MRE11P49959 708 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 CRYBB1P53674 252 aaPredicted RBP8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 NPEPPSP55786 919 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 ANAPC15P60006 121 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 DLX2Q07687 328 aaPredicted RBP8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 MTERF2Q49AM1 385 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 PLA2G4FQ68DD2 849 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 Q6ZVU0 165 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 KSR1Q8IVT5 923 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 TMEM151AQ8N4L1 468 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 SPPL3Q8TCT6 385 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 TNPO1Q92973 898 aaKnown RBP8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 TNFRSF25Q93038 417 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 GTF3C6Q969F1 213 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 KIF2CQ99661 725 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 KCNMB3Q9NPA1 279 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 RGS18Q9NS28 235 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 RGL1Q9NZL6 768 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 VAV3Q9UKW4 847 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 AKT3Q9Y243 479 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 SQORQ9Y6N5 450 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 ADGRA3Q8IWK6 1321 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 STK36Q9NRP7 1315 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 ATG2AQ2TAZ0 1938 aa8.23□□□□□ -1.09
PRPF4B-208ENST00000490653 CCDC194A0A1B0GVG4 234 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 RNF225M0QZC1 329 aaPredicted RBP8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 MAGEB2O15479 319 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 LINC01565O15544 149 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 SPINT1O43278 529 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 CCNT1O60563 726 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 ITGB1P05556 798 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 FGFR1P11362 822 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 SARSP49591 514 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 GPC3P51654 580 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 FAM189BP81408 668 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 ZP2Q05996 745 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 C8orf34Q49A92 452 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 GALNT17Q6IS24 598 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 LRRC55Q6ZSA7 311 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 HFE2Q6ZVN8 426 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 ANO5Q75V66 913 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 KRT25Q7Z3Z0 450 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 ADGRD2Q7Z7M1 963 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 NEK8Q86SG6 692 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 NPAS4Q8IUM7 802 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 CCDC83Q8IWF9 413 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 KLHL23Q8NBE8 558 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 CLP1Q92989 425 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 MRPL38Q96DV4 380 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 DYDC2Q96IM9 177 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 SAMD11Q96NU1 681 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 NIFKQ9BYG3 293 aaKnown RBP8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 C22orf23Q9BZE7 217 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 IGFLR1Q9H665 355 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 PLAGL2Q9UPG8 496 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 PCDHB7Q9Y5E2 793 aa8.22□□□□□ -1.09
PRPF4B-208ENST00000490653 FNDC1Q4ZHG4 1894 aaPredicted RBP8.21□□□□□ -1.09
PRPF4B-208ENST00000490653 ZNF318Q5VUA4 2279 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 A0A087WZ62 844 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 IGKV6-21A0A0C4DH24 114 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 TBKBP1A7MCY6 615 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 C5orf67F2Z3F1 127 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 GPR182O15218 404 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 CDKL5O76039 1030 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 RB1P06400 928 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 ATP2B1P20020 1258 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 SFNP31947 248 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 KRT2P35908 639 aa8.21□□□□□ -1.1
PRPF4B-208ENST00000490653 JAK3P52333 1124 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms