RNA–Protein interactions for RNA: ENST00000490609.1

COL2A1-207, Transcript of collagen type II alpha 1 chain, humanhuman

TSL 2

Gene COL2A1, Length 679 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-207ENST00000490609 FAM20AQ96MK3 541 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 NECTIN4Q96NY8 510 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 INO80BQ9C086 356 aaPredicted RBP17.42■□□□□ 0.38
COL2A1-207ENST00000490609 RNF39Q9H2S5 420 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 XPNPEP1Q9NQW7 623 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 TSHZ2Q9NRE2 1034 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 MIOSQ9NXC5 875 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 TPCN1Q9ULQ1 816 aa17.42■□□□□ 0.38
COL2A1-207ENST00000490609 P4HBP07237 508 aaKnown RBP17.41■□□□□ 0.38
COL2A1-207ENST00000490609 SRGAP2CP0DJJ0 459 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 FDPSP14324 419 aaKnown RBP17.41■□□□□ 0.38
COL2A1-207ENST00000490609 LAMTOR4Q0VGL1 99 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 CES5AQ6NT32 575 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 GLB1LQ6UWU2 654 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 ZDHHC14Q8IZN3 488 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 TMEM105Q8N8V8 129 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 KLHL5Q96PQ7 755 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 BMP2KQ9NSY1 1161 aaPredicted RBP17.41■□□□□ 0.38
COL2A1-207ENST00000490609 MARCH5Q9NX47 278 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 LIMD1Q9UGP4 676 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 SORCS3Q9UPU3 1222 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 NR2E1Q9Y466 385 aa17.41■□□□□ 0.38
COL2A1-207ENST00000490609 F8W810 466 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 WNT7AO00755 349 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 CPLX1O14810 134 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 CNPP09543 421 aaKnown RBP17.4■□□□□ 0.38
COL2A1-207ENST00000490609 SKIP12755 728 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 MTHFRP42898 656 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 CLCN4P51793 760 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 EPHA7Q15375 998 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 TMC5Q6UXY8 1006 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 NEK8Q86SG6 692 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 POTEDQ86YR6 584 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 C4orf19Q8IY42 314 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 RNF168Q8IYW5 571 aaPredicted RBP17.4■□□□□ 0.38
COL2A1-207ENST00000490609 RSPH1Q8WYR4 309 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 DYDC2Q96IM9 177 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 CEP170P1Q96L14 293 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 GBP3Q9H0R5 595 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 PDRG1Q9NUG6 133 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 GVINP1Q7Z2Y8 2422 aa17.4■□□□□ 0.38
COL2A1-207ENST00000490609 NRP1O14786 923 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 INPPL1O15357 1258 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 PFKFB2O60825 505 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 N4BP1O75113 896 aaKnown RBP17.39■□□□□ 0.37
COL2A1-207ENST00000490609 SLITRK3O94933 977 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 RAB27AP51159 221 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 CTTNQ14247 550 aaKnown RBP17.39■□□□□ 0.37
COL2A1-207ENST00000490609 AMHR2Q16671 573 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 PIK3AP1Q6ZUJ8 805 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 SRGAP1Q7Z6B7 1085 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 GPR149Q86SP6 731 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 FERMT3Q86UX7 667 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 COLGALT2Q8IYK4 626 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 UBALD2Q8IYN6 164 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 PRRX2Q99811 253 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 LXNQ9BS40 222 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 EIF2AQ9BY44 585 aaKnown RBP17.39■□□□□ 0.37
COL2A1-207ENST00000490609 RSAD1Q9HA92 442 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 DZANK1Q9NVP4 752 aa17.39■□□□□ 0.37
COL2A1-207ENST00000490609 H0Y858 1186 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 TBX3O15119 743 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 CCNT1O60563 726 aaKnown RBP17.38■□□□□ 0.37
COL2A1-207ENST00000490609 POMCP01189 267 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 NCLP19338 710 aaKnown RBP17.38■□□□□ 0.37
COL2A1-207ENST00000490609 YWHABP31946 246 aaKnown RBP17.38■□□□□ 0.37
COL2A1-207ENST00000490609 CA8P35219 290 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 NR5A1Q13285 461 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 MTMR3Q13615 1198 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 GIT2Q14161 759 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 EMC2Q15006 297 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 ATAT1Q5SQI0 421 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 POTEGQ6S5H5 508 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 GSTCDQ8NEC7 633 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 PSPC1Q8WXF1 523 aaKnown RBP17.38■□□□□ 0.37
COL2A1-207ENST00000490609 PGBD4Q96DM1 585 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 HSD17B14Q9BPX1 270 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 JPH2Q9BR39 696 aaPredicted RBP17.38■□□□□ 0.37
COL2A1-207ENST00000490609 USTQ9Y2C2 406 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 VWA8A3KMH1 1905 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 STK36Q9NRP7 1315 aa17.38■□□□□ 0.37
COL2A1-207ENST00000490609 NOTCH4Q99466 2003 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 TSPAN1O60635 241 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 SSBP05455 408 aaKnown RBP eCLIP17.37■□□□□ 0.37
COL2A1-207ENST00000490609 NPR3P17342 541 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 RFC5P40937 340 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 PTENP60484 403 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 CYP4A11Q02928 519 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 RNASELQ05823 741 aaKnown RBP17.37■□□□□ 0.37
COL2A1-207ENST00000490609 DSC1Q08554 894 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 KIAA0319Q5VV43 1072 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 IFNLR1Q8IU57 520 aaPredicted RBP17.37■□□□□ 0.37
COL2A1-207ENST00000490609 RNF149Q8NC42 400 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 ASAP3Q8TDY4 903 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 SLC7A3Q8WY07 619 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 TMEM175Q9BSA9 504 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 HES2Q9Y543 173 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 PPME1Q9Y570 386 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 IPPQ9Y573 584 aa17.37■□□□□ 0.37
COL2A1-207ENST00000490609 A0A087WWV3 80 aa17.36■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms